RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 MRPS16Q9Y3D3 137 aaKnown RBP8.28□□□□□ -1.08
SFXN3-207ENST00000489434 AGPAT2O15120 278 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 MRPS12O15235 138 aaKnown RBP8.27□□□□□ -1.09
SFXN3-207ENST00000489434 TSC22D2O75157 780 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 SCGB1D2O95969 90 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 PRB4P10163 310 aaPredicted RBP8.27□□□□□ -1.09
SFXN3-207ENST00000489434 ZNF846Q147U1 533 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 GUK1Q16774 197 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 ESRGQ1W209 222 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 IAH1Q2TAA2 248 aaPredicted RBP8.27□□□□□ -1.09
SFXN3-207ENST00000489434 C4orf46Q504U0 113 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 SPANXN2Q5MJ10 180 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 C10orf113Q5VZT2 155 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 PYGO2Q9BRQ0 406 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 GGACTQ9BVM4 153 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 V9GYH0 126 aa8.27□□□□□ -1.09
SFXN3-207ENST00000489434 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 APOBP04114 4563 aaKnown RBP8.26□□□□□ -1.09
SFXN3-207ENST00000489434 TRGV2A0A075B6R0 118 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 TRAV12-3A0A0B4J271 114 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 NAP1L6A6NFF2 107 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 J3KRW8 73 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 EREGO14944 169 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 CCNKO75909 580 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 SNRPCP09234 159 aaKnown RBP8.26□□□□□ -1.09
SFXN3-207ENST00000489434 HOXA5P20719 270 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 DAZ2Q13117 558 aaKnown RBP8.26□□□□□ -1.09
SFXN3-207ENST00000489434 Q6ZRG5 221 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 CHAC2Q8WUX2 184 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 ODF3Q96PU9 254 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 KRTAP1-5Q9BYS1 174 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 ZNF586Q9NXT0 402 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 GSKIPQ9P0R6 139 aa8.26□□□□□ -1.09
SFXN3-207ENST00000489434 H3BTX0 84 aa8.25□□□□□ -1.09
SFXN3-207ENST00000489434 NDUFB6O95139 128 aa8.25□□□□□ -1.09
SFXN3-207ENST00000489434 OR4E1P0C645 316 aa8.25□□□□□ -1.09
SFXN3-207ENST00000489434 KIR3DS1Q14943 382 aa8.25□□□□□ -1.09
SFXN3-207ENST00000489434 TRIQKQ629K1 86 aa8.25□□□□□ -1.09
SFXN3-207ENST00000489434 ZNF680Q8NEM1 530 aa8.25□□□□□ -1.09
SFXN3-207ENST00000489434 PARD6GQ9BYG4 376 aaPredicted RBP8.25□□□□□ -1.09
SFXN3-207ENST00000489434 TMPRSS5Q9H3S3 457 aa8.25□□□□□ -1.09
SFXN3-207ENST00000489434 DNAJC4Q9NNZ3 241 aa8.25□□□□□ -1.09
SFXN3-207ENST00000489434 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
SFXN3-207ENST00000489434 CENPXA8MT69 81 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 PRAC2D3DTV9 90 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 L7N2F9 121 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 SLC17A3O00476 420 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 SLC25A5P05141 298 aaKnown RBP8.24□□□□□ -1.09
SFXN3-207ENST00000489434 CT45A10P0DMU9 189 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 IGLC2P0DOY2 106 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 VAMP2P63027 116 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 OPCMLQ14982 345 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 Q6ZTI0 123 aa8.24□□□□□ -1.09
SFXN3-207ENST00000489434 NPIPB6E9PJ23 425 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 H3BQ15 152 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 SIVA1O15304 175 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 CAMLGP49069 296 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 C12orf45Q8N5I9 185 aaPredicted RBP8.23□□□□□ -1.09
SFXN3-207ENST00000489434 OR1L4Q8NGR5 311 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 TMEM37Q8WXS4 190 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 PFDN5Q99471 154 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 MGST2Q99735 147 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 FLVCR2Q9UPI3 526 aa8.23□□□□□ -1.09
SFXN3-207ENST00000489434 RCL1Q9Y2P8 373 aaKnown RBP8.23□□□□□ -1.09
SFXN3-207ENST00000489434 TRGV1A0A0A0MS02 117 aa8.22□□□□□ -1.09
SFXN3-207ENST00000489434 C7orf66A4D0T2 115 aa8.22□□□□□ -1.09
SFXN3-207ENST00000489434 C7orf71A4D174 169 aa8.22□□□□□ -1.09
SFXN3-207ENST00000489434 ZNF253O75346 499 aa8.22□□□□□ -1.09
SFXN3-207ENST00000489434 LINC00315P59091 139 aa8.22□□□□□ -1.09
SFXN3-207ENST00000489434 ZNF431Q8TF32 576 aaPredicted RBP8.22□□□□□ -1.09
SFXN3-207ENST00000489434 SAT2Q96F10 170 aaPredicted RBP8.22□□□□□ -1.09
SFXN3-207ENST00000489434 C18orf15Q96N68 181 aa8.22□□□□□ -1.09
SFXN3-207ENST00000489434 GSN-AS1Q9NRJ2 163 aa8.22□□□□□ -1.09
SFXN3-207ENST00000489434 FUT9Q9Y231 359 aa8.22□□□□□ -1.09
SFXN3-207ENST00000489434 A0A096LPF7 62 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 LINC00854A0A1B0GVQ3 168 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 EPM2AB3EWF7 344 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 MBPP02686 304 aaPredicted RBP8.21□□□□□ -1.1
SFXN3-207ENST00000489434 CAV2P51636 162 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 ERVFC1-1P60608 527 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 ARL16Q0P5N6 197 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 MORN5Q5VZ52 161 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 NRARPQ7Z6K4 114 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 EIF4E3Q8N5X7 224 aaKnown RBP8.21□□□□□ -1.1
SFXN3-207ENST00000489434 MITD1Q8WV92 249 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 MRPL53Q96EL3 112 aaKnown RBP8.21□□□□□ -1.1
SFXN3-207ENST00000489434 SRRQ9GZT4 340 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 C20orf85Q9H1P6 137 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 UQCC1Q9NVA1 299 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 PRELID1Q9Y255 219 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
SFXN3-207ENST00000489434 hCG_2014768A0A024R1R8 64 aa8.2□□□□□ -1.1
SFXN3-207ENST00000489434 TRAV9-2A0A087WT02 112 aa8.2□□□□□ -1.1
SFXN3-207ENST00000489434 PAX4O43316 350 aa8.2□□□□□ -1.1
SFXN3-207ENST00000489434 NXPH4O95158 308 aa8.2□□□□□ -1.1
SFXN3-207ENST00000489434 GPX1P07203 203 aa8.2□□□□□ -1.1
SFXN3-207ENST00000489434 PVALBP20472 110 aaPredicted RBP8.2□□□□□ -1.1
SFXN3-207ENST00000489434 RNASE4P34096 147 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms