RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 HLA-DQA1P01909 254 aa8.38□□□□□ -1.07
ITSN1-231ENST00000489261 ARL3P36405 182 aa8.38□□□□□ -1.07
ITSN1-231ENST00000489261 BLCAPP62952 87 aa8.38□□□□□ -1.07
ITSN1-231ENST00000489261 KRTAP1-1Q07627 177 aa8.38□□□□□ -1.07
ITSN1-231ENST00000489261 Q6YL49 198 aa8.38□□□□□ -1.07
ITSN1-231ENST00000489261 PRNTQ86SH4 94 aa8.38□□□□□ -1.07
ITSN1-231ENST00000489261 HIST3H2BBQ8N257 126 aa8.38□□□□□ -1.07
ITSN1-231ENST00000489261 NSD1Q96L73 2696 aaPredicted RBP8.38□□□□□ -1.07
ITSN1-231ENST00000489261 SETD2Q9BYW2 2564 aaPredicted RBP8.38□□□□□ -1.07
ITSN1-231ENST00000489261 FN1P02751 2386 aaKnown RBP8.37□□□□□ -1.07
ITSN1-231ENST00000489261 A0A1W2PS18 150 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 RBAKDNA6NC62 111 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 NPIPB6E9PJ23 425 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 FOXA3P55318 350 aaPredicted RBP8.37□□□□□ -1.07
ITSN1-231ENST00000489261 CFHR3Q02985 330 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 Q71RC1 249 aaPredicted RBP8.37□□□□□ -1.07
ITSN1-231ENST00000489261 BCL6BQ8N143 479 aaPredicted RBP8.37□□□□□ -1.07
ITSN1-231ENST00000489261 GBGT1Q8N5D6 347 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 MRPL18Q9H0U6 180 aaKnown RBP8.37□□□□□ -1.07
ITSN1-231ENST00000489261 SMAD5-AS1Q9Y6J3 95 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 NF1P21359 2839 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 ZANQ9Y493 2812 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 ABCA1O95477 2261 aa8.37□□□□□ -1.07
ITSN1-231ENST00000489261 CLPSL1A2RUU4 121 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 SNURFLB1AK76 121 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 CT45A10P0DMU9 189 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 PF4V1P10720 104 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 Q0VG73 95 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 DNLZQ5SXM8 178 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 PRR27Q6MZM9 219 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 C16orf54Q6UWD8 224 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 NHLRC2Q8NBF2 726 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 C12orf57Q99622 126 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 VPREB3Q9UKI3 123 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 CSPG4Q6UVK1 2322 aa8.36□□□□□ -1.07
ITSN1-231ENST00000489261 K7EMT4 169 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 IGHV4-59P01825 116 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 IGHG4P01861 327 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 BMI1P35226 326 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 SRSF2Q01130 221 aaKnown RBP8.35□□□□□ -1.07
ITSN1-231ENST00000489261 Q6AWC8 147 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 LCN12Q6JVE5 192 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 TMEM136Q6ZRR5 245 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 MAPK1IP1LQ8NDC0 245 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 NUP35Q8NFH5 326 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 OR4X2Q8NGF9 303 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 SGK494Q96LW2 274 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 NDFIP1Q9BT67 221 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 LINC00527Q9UJ94 153 aa8.35□□□□□ -1.07
ITSN1-231ENST00000489261 TLN2Q9Y4G6 2542 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 A0A1B0GW15 77 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 CHEK1O14757 476 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 ELANEP08246 267 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 CBLN1P23435 193 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 RPS20P60866 119 aaKnown RBP8.34□□□□□ -1.07
ITSN1-231ENST00000489261 SLC35B1P78383 322 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 FAM106AQ4KMX7 169 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 SAMD13Q5VXD3 122 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 RBPMS2Q6ZRY4 209 aaKnown RBP8.34□□□□□ -1.07
ITSN1-231ENST00000489261 TMEM86BQ8N661 226 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 TMEM18Q96B42 140 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 NOL4LQ96MY1 436 aaPredicted RBP8.34□□□□□ -1.07
ITSN1-231ENST00000489261 NEU1Q99519 415 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 GPR61Q9BZJ8 451 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 PPP1R14DQ9NXH3 145 aa8.34□□□□□ -1.07
ITSN1-231ENST00000489261 PEF1Q9UBV8 284 aaKnown RBP8.34□□□□□ -1.07
ITSN1-231ENST00000489261 HIVEP2P31629 2446 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 TRAV8-1A0A0A6YYK1 113 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 IFITM10A6NMD0 228 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 M0R3E3 92 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 CD5LO43866 347 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 APCSP02743 223 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 CRISP2P16562 243 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 TCL1AP56279 114 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 PAFAH1B2P68402 229 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 S100A12P80511 92 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 FOXE3Q13461 319 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 OR10J3Q5JRS4 329 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 FAM162BQ5T6X4 162 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 LINC00322Q6ZN03 302 aaPredicted RBP8.33□□□□□ -1.08
ITSN1-231ENST00000489261 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 GLMPQ8WWB7 406 aa8.33□□□□□ -1.08
ITSN1-231ENST00000489261 PACRGQ96M98 296 aaPredicted RBP8.33□□□□□ -1.08
ITSN1-231ENST00000489261 NIPBLQ6KC79 2804 aaeCLIP8.33□□□□□ -1.08
ITSN1-231ENST00000489261 IGHV3-35A0A0C4DH35 117 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 A8MWP6 167 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 INAFM1C9JVW0 142 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 ESDP10768 282 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 PSMB8P28062 276 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 RAB4BP61018 213 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 RIGQ13278 110 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 GFI1BQ5VTD9 330 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 MRPL54Q6P161 138 aaKnown RBP8.32□□□□□ -1.08
ITSN1-231ENST00000489261 OR2D3Q8NGH3 330 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 OR10D4PQ8NGN7 298 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 ZC2HC1AQ96GY0 325 aa8.32□□□□□ -1.08
ITSN1-231ENST00000489261 PRR25Q96S07 402 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms