RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 CD24P25063 80 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 FOXA3P55318 350 aaPredicted RBP5.05□□□□□ -1.6
SIK3-212ENST00000488337 DUX4L9Q6RFH8 374 aaPredicted RBP5.05□□□□□ -1.6
SIK3-212ENST00000488337 CNEP1R1Q8N9A8 125 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 PRSS22Q9GZN4 317 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 EYSQ5T1H1 3165 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 SZT2Q5T011 3432 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 SRRM4A7MD48 611 aaKnown RBP5.05□□□□□ -1.6
SIK3-212ENST00000488337 HIGD1CA8MV81 97 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 NBR2O15453 112 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 HLA-DMBP28068 263 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 UBE2D1P51668 147 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 EMP1P54849 157 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 HSPE1P61604 102 aaKnown RBP5.05□□□□□ -1.6
SIK3-212ENST00000488337 ZNF503Q96F45 646 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 CCDC168Q8NDH2 2452 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 LINC01546A6NGU7 62 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 MPDU1O75352 247 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 COL8A2P25067 703 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 KLF17Q5JT82 389 aaPredicted RBP5.05□□□□□ -1.6
SIK3-212ENST00000488337 LSM4Q9Y4Z0 139 aaKnown RBP5.05□□□□□ -1.6
SIK3-212ENST00000488337 PI4KAP42356 2102 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 FAM236AA0A1B0GUQ0 79 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 FAM236BA0A1B0GV22 79 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 DNPH1O43598 174 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 FCER1GP30273 86 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 HES1Q14469 280 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 OR4C13Q8NGP0 309 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 SPANXDQ9BXN6 97 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 CYSTM1Q9H1C7 97 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 JPT2Q9H910 190 aa5.05□□□□□ -1.6
SIK3-212ENST00000488337 ZFP2Q6ZN57 461 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 FAM57AQ8TBR7 257 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 MGST2Q99735 147 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 FAM173AQ9BQD7 235 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 IMUPQ9GZP8 106 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 EFNA4P52798 201 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 CT83Q5H943 113 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 C15orf53Q8NAA6 179 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 SRXN1Q9BYN0 137 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 TTTY13Q9BZ97 58 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 PRORYQ9H606 182 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 ZNF355PQ9NSJ1 428 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 SLC25A10Q9UBX3 287 aaPredicted RBP5.04□□□□□ -1.6
SIK3-212ENST00000488337 ZNHIT1O43257 154 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 GFRALQ6UXV0 394 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 LINC00336Q6ZUF6 198 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 FREM1Q5H8C1 2179 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 TRIOO75962 3097 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 SPEGQ15772 3267 aa5.04□□□□□ -1.6
SIK3-212ENST00000488337 FAM240AA0A1B0GVK7 77 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 TCL1BO95988 128 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 CD7P09564 240 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 RPL35AP18077 110 aaKnown RBP5.03□□□□□ -1.6
SIK3-212ENST00000488337 CACNG7P62955 275 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 LOXL1Q08397 574 aaPredicted RBP5.03□□□□□ -1.6
SIK3-212ENST00000488337 KLRB1Q12918 225 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 C9orf153Q5TBE3 101 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 ASPHD1Q5U4P2 390 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 SDIM1Q6ZPB5 146 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 ZNF488Q96MN9 340 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 TRGV9Q99603 122 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 TRAV17A0A0B4J275 112 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 MYMXA0A1B0GTQ4 84 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 A8MWV9 139 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 TIMM8AO60220 97 aaPredicted RBP5.03□□□□□ -1.6
SIK3-212ENST00000488337 HIST1H4AP62805 103 aaKnown RBP5.03□□□□□ -1.6
SIK3-212ENST00000488337 DEFB121Q5J5C9 76 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 FGFRL1Q8N441 504 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 GFRA4Q9GZZ7 299 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 U3KQK5 164 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 FER1L5A0AVI2 2057 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 NPIPB11E5RHQ5 1161 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 TIMM23O14925 209 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 MAPKAPK5-AS1Q8N8E1 139 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 FGFBP3Q8TAT2 258 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 PRDM14Q9GZV8 571 aa5.03□□□□□ -1.6
SIK3-212ENST00000488337 TRANK1O15050 2925 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 IGHV5-10-1A0A0J9YXX1 117 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 HAX1O00165 279 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 AVPP01185 164 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 EDDM3BP56851 147 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 ZNF816Q0VGE8 651 aaPredicted RBP5.02□□□□□ -1.61
SIK3-212ENST00000488337 FAM19A4Q96LR4 140 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 PYGO1Q9Y3Y4 419 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 CHD8Q9HCK8 2581 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 EIF4EBP1Q13541 118 aaPredicted RBP5.02□□□□□ -1.61
SIK3-212ENST00000488337 OCIAD1Q9NX40 245 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 DKK2Q9UBU2 259 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 KLF13Q9Y2Y9 288 aaPredicted RBP5.02□□□□□ -1.61
SIK3-212ENST00000488337 V9GYY9 64 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 DYSFO75923 2080 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 ATP5G1P05496 136 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 CAMPP49913 170 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 PCOLCEQ15113 449 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 CEMP1Q6PRD7 247 aaPredicted RBP5.02□□□□□ -1.61
SIK3-212ENST00000488337 EXOC3-AS1Q8N2X6 119 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 NCOR2Q9Y618 2525 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 NGFP01138 241 aa5.02□□□□□ -1.61
SIK3-212ENST00000488337 NPYP01303 97 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms