RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 SUPT6HQ7KZ85 1726 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 FMN2Q9NZ56 1722 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TOGARAM1Q9Y4F4 1720 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 C3P01024 1663 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PPRC1Q5VV67 1664 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 KIF21AQ7Z4S6 1674 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PBRM1Q86U86 1689 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LMO7Q8WWI1 1683 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CACNA1EQ15878 2313 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CCDC171Q6TFL3 1326 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LRP5O75197 1615 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 NESP48681 1621 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PAPPAQ13219 1627 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ABCA9Q8IUA7 1624 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MYO3AQ8NEV4 1616 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ABCA5Q8WWZ7 1642 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 RNF17Q9BXT8 1623 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MAP3K4Q9Y6R4 1608 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TRBV7-3A0A075B6L6 115 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 A0A087WVE0 104 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 GVQW2A0A096LPI5 108 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 A0A096LPI6 279 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TRAV10A0A0B4J240 114 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 A0A0D9SG42 100 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 A0A0G2JND7 137 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 A0A0J9YY99 117 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TRBV7-4A0A0J9YYF1 115 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TRBV7-7A0A0K0K1E9 115 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TRBV10-3A0A0K0K1G6 114 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LOC107984640A0A0U1RRK4 108 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SPAARA0A1B0GVQ0 90 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 A0A1B0GX51 115 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TCRBV3S1A0A5B6 114 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PQLC2LA1A4F0 135 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CLPSL1A2RUU4 121 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 C7orf71A4D174 169 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 EFCAB10A6NFE3 127 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR2T8A6NH00 312 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 A6NIN4 97 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CLDN24A6NM45 220 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ZNF815PA8K554 130 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ZNF727A8MUV8 499 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TMEM14DPA8MWL7 114 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IQCF6A8MYZ5 107 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LOC730098B7Z3J9 87 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MCRIP1C9JLW8 97 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 E7EUB6 86 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LRRN3E7EW58 273 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 H3BNG1 76 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 H7BYZ3 331 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 H7BZZ5 65 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 I3L2K1 104 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 J3QLW9 94 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 K7EP13 123 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 DEGS1O15121 323 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CCL25O15444 150 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TGOLN2O43493 480 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 NUPR1O60356 82 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TPST1O60507 370 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 NIPSNAP2O75323 286 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SULT1C4O75897 302 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SNAPC5O75971 98 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ERC2-IT1O76042 136 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MPC2O95563 127 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 HAND1O96004 215 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TNFP01375 233 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IFNA10P01566 189 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IFNA7P01567 189 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IFNA5P01569 189 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IGHV3-30P01768 117 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IGHV3-33P01772 117 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 HLA-DRB1P01911 266 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CD3DP04234 171 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IL5P05113 134 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SERPINE1P05121 402 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ISG15P05161 165 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CSN2P05814 226 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 NMBP08949 121 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CXCL1P09341 107 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CTXN2P0C2S0 81 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OCM2P0CE71 109 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IGLC6P0CF74 106 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TRAPPC2P0DI81 140 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TRAPPC2BP0DI82 140 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IGHV3-30-5P0DP03 117 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 BCL2P10415 239 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 NEFHP12036 1026 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SLC25A4P12235 298 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SLC25A6P12236 298 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CCL4P13236 92 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 HLA-EP13747 358 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 HIST1H1BP16401 226 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SPRR2DP22532 72 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 EVI2AP22794 236 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CRYGSP22914 178 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 RPS3P23396 243 aaKnown RBP eCLIP-0.04□□□□□ -2.427e-64■■■■■ 337.8
SMC4-219ENST00000487747 SRIP30626 198 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CASQ1P31415 396 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PHBP35232 272 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 RPL22P35268 128 aaKnown RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms