RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 OR5D16Q8NGK9 328 aa2.1□□□□□ -2.07
CUL3-211ENST00000487558 LINC00470Q9BZP3 86 aa2.1□□□□□ -2.07
CUL3-211ENST00000487558 MYH13Q9UKX3 1938 aa2.1□□□□□ -2.07
CUL3-211ENST00000487558 CITO14578 2027 aa2.1□□□□□ -2.07
CUL3-211ENST00000487558 POLEQ07864 2286 aa2.1□□□□□ -2.07
CUL3-211ENST00000487558 TNS3Q68CZ2 1445 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 TRAV13-1A0A0B4J241 112 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 NDUFB3O43676 98 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 UBL3O95164 117 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 PRB1P04280 392 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 CXCL1P09341 107 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 ZNF25P17030 456 aaPredicted RBP2.09□□□□□ -2.07
CUL3-211ENST00000487558 BRS3P32247 399 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 RNASE4P34096 147 aaKnown RBP2.09□□□□□ -2.07
CUL3-211ENST00000487558 ARPP19P56211 112 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 COPZ1P61923 177 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 RPS25P62851 125 aaKnown RBP2.09□□□□□ -2.07
CUL3-211ENST00000487558 GLYATL3Q5SZD4 288 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 Q8N2B8 174 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 LINC00311Q8N616 119 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 OR4C6Q8NH72 309 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 ZNF714Q96N38 554 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 PDCD10Q9BUL8 212 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 NPCDR1Q9BY65 106 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 CBLN4Q9NTU7 201 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 HS3ST2Q9Y278 367 aa2.09□□□□□ -2.07
CUL3-211ENST00000487558 TCOF1Q13428 1488 aaKnown RBP2.08□□□□□ -2.08
CUL3-211ENST00000487558 CEP164Q9UPV0 1460 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 MYO5AQ9Y4I1 1855 aaKnown RBP2.08□□□□□ -2.08
CUL3-211ENST00000487558 IGKV3D-7A0A0C4DH55 119 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 IGKV3OR2-268A0A0C4DH90 116 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 GNG7O60262 68 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 NCR2O95944 276 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 SMIM6P0DI80 62 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 HLA-EP13747 358 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 RPL22P35268 128 aaKnown RBP2.08□□□□□ -2.08
CUL3-211ENST00000487558 SSR2P43308 183 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 RNASE10Q5GAN6 216 aaKnown RBP2.08□□□□□ -2.08
CUL3-211ENST00000487558 TMEM244Q5VVB8 128 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 Q5XG85 94 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 UNQ6190/PRO20217Q6UXQ8 127 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 CTAGE3PQ8IX95 158 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 TEX29Q8N6K0 151 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 OR5A2Q8NGI9 324 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 MCEEQ96PE7 176 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 RNF11Q9Y3C5 154 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 TANC2Q9HCD6 1990 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 FN1P02751 2386 aaKnown RBP2.08□□□□□ -2.08
CUL3-211ENST00000487558 IBTKQ9P2D0 1353 aaPredicted RBP2.08□□□□□ -2.08
CUL3-211ENST00000487558 FGD6Q6ZV73 1430 aa2.08□□□□□ -2.08
CUL3-211ENST00000487558 SBF1O95248 1867 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 RIMBP3CA6NJZ7 1639 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 RIMBP3BA6NNM3 1639 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 RIMBP3Q9UFD9 1639 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 H3BMG7 143 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 OR1I1O60431 355 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 IGF2P01344 180 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 MT-ND4LP03901 98 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 KDELR1P24390 212 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 GUCA1AP43080 201 aaPredicted RBP2.07□□□□□ -2.08
CUL3-211ENST00000487558 RAB5CP51148 216 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 ESRGQ1W209 222 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 HSD17B12Q53GQ0 312 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 HAGHLQ6PII5 290 aaPredicted RBP2.07□□□□□ -2.08
CUL3-211ENST00000487558 TMEM14EPQ6UXP3 125 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 PHF5AQ7RTV0 110 aaKnown RBP2.07□□□□□ -2.08
CUL3-211ENST00000487558 PDZD9Q8IXQ8 264 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 OR4B1Q8NGF8 309 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 OR5H6Q8NGV6 325 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 REG4Q9BYZ8 158 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 BANF2Q9H503 90 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 TAF9BQ9HBM6 251 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 ARHGEF28Q8N1W1 1705 aaKnown RBP2.07□□□□□ -2.08
CUL3-211ENST00000487558 DSPPQ9NZW4 1301 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 NAIPQ13075 1403 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 PRG4Q92954 1404 aaPredicted RBP2.07□□□□□ -2.08
CUL3-211ENST00000487558 MYH1P12882 1939 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 CCDC88CQ9P219 2028 aa2.07□□□□□ -2.08
CUL3-211ENST00000487558 TRPM1Q7Z4N2 1603 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 IGKV2-40A0A087WW87 121 aaPredicted RBP2.06□□□□□ -2.08
CUL3-211ENST00000487558 TRAV3A0A0B4J244 114 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 TRBV27A0A0K0K1C4 114 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 OR2T8A6NH00 312 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 C2orf70A6NJV1 201 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 F6UZH7 168 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 IGKV2D-40P01614 121 aaPredicted RBP2.06□□□□□ -2.08
CUL3-211ENST00000487558 MT-ND6P03923 174 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 LSM3P62310 102 aaKnown RBP2.06□□□□□ -2.08
CUL3-211ENST00000487558 PRELID3AQ96N28 172 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 BCL2L10Q9HD36 194 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 TNFSF18Q9UNG2 199 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 SOX21Q9Y651 276 aaPredicted RBP2.06□□□□□ -2.08
CUL3-211ENST00000487558 ATG2AQ2TAZ0 1938 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 GRIN2AQ12879 1464 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 KDM5CP41229 1560 aa2.06□□□□□ -2.08
CUL3-211ENST00000487558 C9orf170A2RU37 121 aa2.05□□□□□ -2.08
CUL3-211ENST00000487558 A8MWV9 139 aa2.05□□□□□ -2.08
CUL3-211ENST00000487558 K7ERJ3 54 aa2.05□□□□□ -2.08
CUL3-211ENST00000487558 NPFFO15130 113 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms