RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 IGHV3-23P01764 117 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 SMR3BP02814 79 aaPredicted RBP8.26□□□□□ -1.09
TRIM56-204ENST00000487252 AKR1C3P42330 323 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 PNRC1Q12796 327 aaPredicted RBP8.26□□□□□ -1.09
TRIM56-204ENST00000487252 C2orf83Q53S99 150 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 TMEM167AQ8TBQ9 72 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 MGST2Q99735 147 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 NIPSNAP3BQ9BS92 247 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 C20orf24Q9BUV8 137 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 SLC25A22Q9H936 323 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 SDF2L1Q9HCN8 221 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 ENY2Q9NPA8 101 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 SMCO3A2RU48 225 aa8.25□□□□□ -1.09
TRIM56-204ENST00000487252 ZFP92A6NM28 416 aa8.25□□□□□ -1.09
TRIM56-204ENST00000487252 SAA1P0DJI8 122 aaPredicted RBP8.25□□□□□ -1.09
TRIM56-204ENST00000487252 RAB5AP20339 215 aa8.25□□□□□ -1.09
TRIM56-204ENST00000487252 CDC34P49427 236 aaPredicted RBP8.25□□□□□ -1.09
TRIM56-204ENST00000487252 PSMB3P49720 205 aa8.25□□□□□ -1.09
TRIM56-204ENST00000487252 MEF2BQ02080 365 aaPredicted RBP8.25□□□□□ -1.09
TRIM56-204ENST00000487252 PRSS8Q16651 343 aa8.25□□□□□ -1.09
TRIM56-204ENST00000487252 OR1L8Q8NGR8 309 aa8.25□□□□□ -1.09
TRIM56-204ENST00000487252 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
TRIM56-204ENST00000487252 NPVFQ9HCQ7 196 aa8.25□□□□□ -1.09
TRIM56-204ENST00000487252 RPL29P47914 159 aaKnown RBP8.24□□□□□ -1.09
TRIM56-204ENST00000487252 CSNK1G2-AS1Q8NCQ2 148 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 VSTM2AQ8TAG5 236 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 TMEM190Q8WZ59 177 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 TMPRSS5Q9H3S3 457 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 BIN3Q9NQY0 253 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 DAZ1Q9NQZ3 744 aaKnown RBP8.24□□□□□ -1.09
TRIM56-204ENST00000487252 NDUFA4L2Q9NRX3 87 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 TMEM242Q9NWH2 141 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 PXMP4Q9Y6I8 212 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 S4R3C0 116 aa8.24□□□□□ -1.09
TRIM56-204ENST00000487252 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 C1orf196B1AJZ1 125 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 CLEC3BP05452 202 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 LINC00869P0C866 280 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 STAG3L2P0CL84 134 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 STAG3L3P0CL85 134 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 RNASE2P10153 161 aaKnown RBP8.23□□□□□ -1.09
TRIM56-204ENST00000487252 RND2P52198 227 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 RAB5BP61020 215 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 RPL8P62917 257 aaKnown RBP8.23□□□□□ -1.09
TRIM56-204ENST00000487252 TNXAQ16473 311 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 MIC13Q5XKP0 118 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 TEPPQ6URK8 271 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 CYP2G1PQ6ZSU1 146 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 TMEM144Q7Z5S9 345 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 TEX45Q8NA69 505 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 ISOC2Q96AB3 205 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 HARBI1Q96MB7 349 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 TXNDC17Q9BRA2 123 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 NAT8Q9UHE5 227 aa8.23□□□□□ -1.09
TRIM56-204ENST00000487252 CGB1A6NKQ9 187 aa8.22□□□□□ -1.09
TRIM56-204ENST00000487252 NPIPB5A8MRT5 1133 aa8.22□□□□□ -1.09
TRIM56-204ENST00000487252 F8W735 103 aaPredicted RBP8.22□□□□□ -1.09
TRIM56-204ENST00000487252 GPX4P36969 197 aaPredicted RBP8.22□□□□□ -1.09
TRIM56-204ENST00000487252 RAB31Q13636 194 aa8.22□□□□□ -1.09
TRIM56-204ENST00000487252 GCSAMLQ5JQS6 135 aa8.22□□□□□ -1.09
TRIM56-204ENST00000487252 C19orf35Q6ZS72 473 aa8.22□□□□□ -1.09
TRIM56-204ENST00000487252 EEF1AKMT3Q96AZ1 226 aa8.22□□□□□ -1.09
TRIM56-204ENST00000487252 CTDSP1Q9GZU7 261 aa8.22□□□□□ -1.09
TRIM56-204ENST00000487252 SLC45A2Q9UMX9 530 aa8.22□□□□□ -1.09
TRIM56-204ENST00000487252 TRBV7-1A0A0A6YYK4 115 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 A0A1W2PPV4 95 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 ZNF727A8MUV8 499 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 F6UZH7 168 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 PAGE4O60829 102 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 EIF3GO75821 320 aaKnown RBP eCLIP8.21□□□□□ -1.1
TRIM56-204ENST00000487252 CXorf1O96002 111 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 CEBPGP53567 150 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 ELOBQ15370 118 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 VMA21Q3ZAQ7 101 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 FAM24BQ8N5W8 94 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 SLC35E1Q96K37 410 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 PRELID1Q9Y255 219 aa8.21□□□□□ -1.1
TRIM56-204ENST00000487252 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 IGHV3-35A0A0C4DH35 117 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 TEX22C9J3V5 150 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 HMGB3O15347 200 aaKnown RBP8.2□□□□□ -1.1
TRIM56-204ENST00000487252 PDE6DO43924 150 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 CRYGCP07315 174 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 NPPCP23582 126 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 B2MP61769 119 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 RHOBP62745 196 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 CDPF1Q6NVV7 123 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 RNASEH2CQ8TDP1 164 aaKnown RBP8.2□□□□□ -1.1
TRIM56-204ENST00000487252 Q8WTZ3 238 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 RNF2Q99496 336 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 SMIM7Q9BQ49 75 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 HINT2Q9BX68 163 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 COMMD5Q9GZQ3 224 aa8.2□□□□□ -1.1
TRIM56-204ENST00000487252 SAV1Q9H4B6 383 aaPredicted RBP8.2□□□□□ -1.1
TRIM56-204ENST00000487252 ZNF430Q9H8G1 570 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms