RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 J3QKU1 62 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 CA1P00915 261 aaPredicted RBP9.2□□□□□ -0.94
PKP4-213ENST00000486254 IGHV4-59P01825 116 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 AMBPP02760 352 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 PLA2G2AP14555 144 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 CRISP2P16562 243 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 PSMB8P28062 276 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 TCL1AP56279 114 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 ZC2HC1AQ96GY0 325 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 ABCA12Q86UK0 2595 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 ZNF785A8K8V0 405 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 HBBP68871 147 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 SAMD13Q5VXD3 122 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 DMRTA1Q5VZB9 504 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 TMEM86BQ8N661 226 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 GATD1Q8NB37 220 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 SGK494Q96LW2 274 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 Q96MF0 132 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 NOL4LQ96MY1 436 aaPredicted RBP9.19□□□□□ -0.94
PKP4-213ENST00000486254 PRR25Q96S07 402 aa9.19□□□□□ -0.94
PKP4-213ENST00000486254 K7EMT4 169 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 PF4V1P10720 104 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 FABP4P15090 132 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 LCN12Q6JVE5 192 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 MRPL54Q6P161 138 aaKnown RBP9.18□□□□□ -0.94
PKP4-213ENST00000486254 Q8N2B8 174 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 RNF152Q8N8N0 203 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 OR10D4PQ8NGN7 298 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 MYOZ3Q8TDC0 251 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 GTSF1Q8WW33 167 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 NPFFR1Q9GZQ6 430 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 LINC00527Q9UJ94 153 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 UTP20O75691 2785 aaKnown RBP9.18□□□□□ -0.94
PKP4-213ENST00000486254 CRYBG3Q68DQ2 2970 aa9.18□□□□□ -0.94
PKP4-213ENST00000486254 DOPEY2Q9Y3R5 2298 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 IGHV3-35A0A0C4DH35 117 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 A8MWP6 167 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 APCSP02743 223 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 BMI1P35226 326 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 RPS20P60866 119 aaKnown RBP9.17□□□□□ -0.94
PKP4-213ENST00000486254 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 PYY3Q5JQD4 70 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 FAM162BQ5T6X4 162 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 OR4X2Q8NGF9 303 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 OR2D3Q8NGH3 330 aa9.17□□□□□ -0.94
PKP4-213ENST00000486254 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
PKP4-213ENST00000486254 ELANEP08246 267 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 FOXE3Q13461 319 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 Q6ZS46 218 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 C8orf86Q6ZUL3 223 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 GPHB5Q86YW7 130 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 KLK15Q9H2R5 256 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 DAZ1Q9NQZ3 744 aaKnown RBP9.16□□□□□ -0.94
PKP4-213ENST00000486254 FRMD6-AS1P0C7T7 363 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 SLC35B1P78383 322 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 KLF5Q13887 457 aaPredicted RBP9.16□□□□□ -0.94
PKP4-213ENST00000486254 JOSD1Q15040 202 aaPredicted RBP9.16□□□□□ -0.94
PKP4-213ENST00000486254 C9orf47Q6ZRZ4 202 aa9.16□□□□□ -0.94
PKP4-213ENST00000486254 PEF1Q9UBV8 284 aaKnown RBP9.16□□□□□ -0.94
PKP4-213ENST00000486254 CHD6Q8TD26 2715 aa9.15□□□□□ -0.94
PKP4-213ENST00000486254 CELSR2Q9HCU4 2923 aa9.15□□□□□ -0.94
PKP4-213ENST00000486254 IGHV3OR16-8A0A075B7F1 116 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.95
PKP4-213ENST00000486254 TRAV8-2A0A0B4J237 113 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 TRBV7-9A0A0J9YWB2 115 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 A0A1B0GUT8 65 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.95
PKP4-213ENST00000486254 TRBV12-3P01733 135 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 CRIP1P50238 77 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 RAB4BP61018 213 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 SLAQ13239 276 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 PDZD11Q5EBL8 140 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 ZNF702PQ9H963 129 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 NIT2Q9NQR4 276 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 TP53TG3Q9ULZ0 132 aa9.15□□□□□ -0.95
PKP4-213ENST00000486254 CENPEQ02224 2701 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 IGHV7-4-1A0A0J9YVY3 117 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 SOCS3O14543 225 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 LINC00310P59036 64 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 RIGQ13278 110 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 FAM106AQ4KMX7 169 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 UNQ9165/PRO28630Q6UXU0 137 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 TCF24Q7RTU0 167 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 MAPK1IP1LQ8NDC0 245 aa9.14□□□□□ -0.95
PKP4-213ENST00000486254 APCP25054 2843 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 SPINK4O60575 86 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 SH2D1AO60880 128 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 CTRLP40313 264 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 GDF5OSQ5U4N7 250 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 TMEM256Q8N2U0 113 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 C8orf49Q96NF6 230 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 ASCL2Q99929 193 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 FOXC2Q99958 501 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 VGLL1Q99990 258 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 CNFNQ9BYD5 112 aa9.13□□□□□ -0.95
PKP4-213ENST00000486254 UFC1Q9Y3C8 167 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms