RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 TMEM97Q5BJF2 176 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 LGALS9CQ6DKI2 356 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 COX8CQ7Z4L0 72 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 LY6G5BQ8NDX9 201 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 DPM3Q9P2X0 92 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 PIEZO2Q9H5I5 2752 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 TACC2O95359 2948 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 IGLV11-55A0A075B6I3 123 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 F8W735 103 aaPredicted RBP17.61■□□□□ 0.41
CLN5-202ENST00000485938 PAX8Q06710 450 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 ZNF48Q96MX3 618 aaPredicted RBP17.61■□□□□ 0.41
CLN5-202ENST00000485938 CST9LQ9H4G1 147 aa17.61■□□□□ 0.41
CLN5-202ENST00000485938 IGKV2-40A0A087WW87 121 aaPredicted RBP17.6■□□□□ 0.41
CLN5-202ENST00000485938 IGKV2D-40P01614 121 aaPredicted RBP17.6■□□□□ 0.41
CLN5-202ENST00000485938 MFAP4P55083 255 aa17.6■□□□□ 0.41
CLN5-202ENST00000485938 PEF1Q9UBV8 284 aaKnown RBP17.6■□□□□ 0.41
CLN5-202ENST00000485938 SEC11AP67812 179 aa17.6■□□□□ 0.41
CLN5-202ENST00000485938 OR1N2Q8NGR9 330 aa17.6■□□□□ 0.41
CLN5-202ENST00000485938 C7orf71A4D174 169 aa17.59■□□□□ 0.41
CLN5-202ENST00000485938 NHLH1Q02575 133 aa17.59■□□□□ 0.41
CLN5-202ENST00000485938 RNF151Q2KHN1 245 aa17.59■□□□□ 0.41
CLN5-202ENST00000485938 PRR30Q53SZ7 412 aaPredicted RBP17.59■□□□□ 0.41
CLN5-202ENST00000485938 OR11H6Q8NGC7 330 aa17.59■□□□□ 0.41
CLN5-202ENST00000485938 COL25A1Q9BXS0 654 aaPredicted RBP17.59■□□□□ 0.41
CLN5-202ENST00000485938 SAPCD1Q5SSQ6 148 aa17.59■□□□□ 0.41
CLN5-202ENST00000485938 PRR25Q96S07 402 aa17.59■□□□□ 0.41
CLN5-202ENST00000485938 NPIPB5A8MRT5 1133 aa17.58■□□□□ 0.41
CLN5-202ENST00000485938 C5orf64Q2M2E5 130 aa17.58■□□□□ 0.41
CLN5-202ENST00000485938 HBDP02042 147 aa17.58■□□□□ 0.4
CLN5-202ENST00000485938 EGR2P11161 476 aaPredicted RBP17.58■□□□□ 0.4
CLN5-202ENST00000485938 FXYD7P58549 80 aa17.58■□□□□ 0.4
CLN5-202ENST00000485938 CACNG7P62955 275 aa17.58■□□□□ 0.4
CLN5-202ENST00000485938 ZNF672Q499Z4 452 aaPredicted RBP17.58■□□□□ 0.4
CLN5-202ENST00000485938 RABAC1Q9UI14 185 aa17.58■□□□□ 0.4
CLN5-202ENST00000485938 A0A1W2PRD5 423 aa17.57■□□□□ 0.4
CLN5-202ENST00000485938 A0A1W2PRF3 423 aa17.57■□□□□ 0.4
CLN5-202ENST00000485938 A0A1W2PRM7 423 aa17.57■□□□□ 0.4
CLN5-202ENST00000485938 PPBPP02775 128 aa17.57■□□□□ 0.4
CLN5-202ENST00000485938 OCIAD2Q56VL3 154 aa17.57■□□□□ 0.4
CLN5-202ENST00000485938 BOD1L2Q8IYS8 172 aa17.57■□□□□ 0.4
CLN5-202ENST00000485938 FOXC1Q12948 553 aa17.56■□□□□ 0.4
CLN5-202ENST00000485938 ARL6IP6Q8N6S5 226 aa17.56■□□□□ 0.4
CLN5-202ENST00000485938 SMKR1H3BMG3 65 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 NPYP01303 97 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 RPL7P18124 248 aaKnown RBP17.55■□□□□ 0.4
CLN5-202ENST00000485938 CEACAM3P40198 252 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 KLRD1Q13241 179 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 C21orf62Q9NYP8 219 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 CEP295Q9C0D2 2601 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 ZNF80P51504 273 aaPredicted RBP17.55■□□□□ 0.4
CLN5-202ENST00000485938 HES1Q14469 280 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 FER1L6-AS1Q8NA97 138 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 Q8TAT8 98 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 LINC01560Q8TB33 94 aa17.55■□□□□ 0.4
CLN5-202ENST00000485938 IGLC6P0CF74 106 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 CKS2P33552 79 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 NDPQ00604 133 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 TWIST1Q15672 202 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 ZNF562Q6V9R5 426 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 ZNF575Q86XF7 245 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 ARPC1AQ92747 370 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 IFI27L1Q96BM0 104 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 ARHGAP32A7KAX9 2087 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 TTC9CQ8N5M4 171 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 VGLL1Q99990 258 aa17.54■□□□□ 0.4
CLN5-202ENST00000485938 FBLL1A6NHQ2 334 aaKnown RBP17.53■□□□□ 0.4
CLN5-202ENST00000485938 ODF3BA8MYP8 253 aa17.53■□□□□ 0.4
CLN5-202ENST00000485938 SMAD7O15105 426 aaKnown RBP17.53■□□□□ 0.4
CLN5-202ENST00000485938 UQCRFS1P47985 274 aa17.53■□□□□ 0.4
CLN5-202ENST00000485938 GAGE12BA1L429 117 aa17.53■□□□□ 0.4
CLN5-202ENST00000485938 IGHV3-23P01764 117 aa17.53■□□□□ 0.4
CLN5-202ENST00000485938 IGHG4P01861 327 aa17.53■□□□□ 0.4
CLN5-202ENST00000485938 SMAD5-AS1Q9Y6J3 95 aa17.53■□□□□ 0.4
CLN5-202ENST00000485938 BMI1P35226 326 aa17.52■□□□□ 0.39
CLN5-202ENST00000485938 OR9G4Q8NGQ1 327 aa17.52■□□□□ 0.39
CLN5-202ENST00000485938 NPFFR1Q9GZQ6 430 aa17.52■□□□□ 0.39
CLN5-202ENST00000485938 THYN1Q9P016 225 aa17.52■□□□□ 0.39
CLN5-202ENST00000485938 NDUFS7O75251 213 aa17.51■□□□□ 0.39
CLN5-202ENST00000485938 TCTAP57738 103 aa17.51■□□□□ 0.39
CLN5-202ENST00000485938 IGFL4Q6B9Z1 124 aa17.51■□□□□ 0.39
CLN5-202ENST00000485938 PSMG3-AS1Q96PY0 264 aa17.51■□□□□ 0.39
CLN5-202ENST00000485938 VKORC1Q9BQB6 163 aa17.51■□□□□ 0.39
CLN5-202ENST00000485938 A1L4Q6 167 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 H3BRM9 83 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 LY6HO94772 140 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 A6NDN8 102 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 SIVA1O15304 175 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 CTSGP08311 255 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 HLA-DMBP28068 263 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 HSD52Q0P140 79 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 ADAMTSL5Q6ZMM2 481 aa17.5■□□□□ 0.39
CLN5-202ENST00000485938 C9orf118A6NHY6 69 aa17.49■□□□□ 0.39
CLN5-202ENST00000485938 RNF185Q96GF1 192 aa17.49■□□□□ 0.39
CLN5-202ENST00000485938 MSRB1Q9NZV6 116 aa17.49■□□□□ 0.39
CLN5-202ENST00000485938 M0R1W7 72 aa17.49■□□□□ 0.39
CLN5-202ENST00000485938 SRSF2Q01130 221 aaKnown RBP17.49■□□□□ 0.39
CLN5-202ENST00000485938 UFSP1Q6NVU6 142 aa17.49■□□□□ 0.39
CLN5-202ENST00000485938 GAGE10A6NGK3 116 aa17.48■□□□□ 0.39
CLN5-202ENST00000485938 PRTN3P24158 256 aa17.48■□□□□ 0.39
CLN5-202ENST00000485938 NCBP2LA6PVI3 153 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms