RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 NKX6-2Q9C056 277 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-207ENST00000485465 DNAH3Q8TD57 4116 aa13.06□□□□□ -0.32
CHMP3-207ENST00000485465 IFNA1P01562 189 aa13.05□□□□□ -0.32
CHMP3-207ENST00000485465 CLLU1Q5K131 121 aa13.05□□□□□ -0.32
CHMP3-207ENST00000485465 CST9LP1Q5W188 147 aa13.05□□□□□ -0.32
CHMP3-207ENST00000485465 APRG1Q8IVJ8 170 aa13.05□□□□□ -0.32
CHMP3-207ENST00000485465 RPUSD4Q96CM3 377 aaKnown RBP13.05□□□□□ -0.32
CHMP3-207ENST00000485465 SLC25A5P05141 298 aaKnown RBP13.04□□□□□ -0.32
CHMP3-207ENST00000485465 CSN1S1P47710 185 aa13.04□□□□□ -0.32
CHMP3-207ENST00000485465 DEFB1P60022 68 aa13.04□□□□□ -0.32
CHMP3-207ENST00000485465 ZNF124Q15973 351 aa13.04□□□□□ -0.32
CHMP3-207ENST00000485465 CMTM2Q8TAZ6 248 aa13.04□□□□□ -0.32
CHMP3-207ENST00000485465 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
CHMP3-207ENST00000485465 WFDC10AQ9H1F0 79 aa13.04□□□□□ -0.32
CHMP3-207ENST00000485465 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 PRB4P10163 310 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-207ENST00000485465 BCL2P10415 239 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 ATP5G3P48201 142 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 HAGHQ16775 308 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 FOXI2Q6ZQN5 318 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 CCDC28AQ8IWP9 274 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 DEFB125Q8N687 156 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 ARL6IP6Q8N6S5 226 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 C5orf17Q8NAS9 161 aa13.03□□□□□ -0.32
CHMP3-207ENST00000485465 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
CHMP3-207ENST00000485465 F6UB75 175 aa13.02□□□□□ -0.33
CHMP3-207ENST00000485465 TAGLN2P37802 199 aaKnown RBP13.02□□□□□ -0.33
CHMP3-207ENST00000485465 GNG5P63218 68 aa13.02□□□□□ -0.33
CHMP3-207ENST00000485465 EBLN2Q6P2I7 272 aa13.02□□□□□ -0.33
CHMP3-207ENST00000485465 SAV1Q9H4B6 383 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-207ENST00000485465 VAX2Q9UIW0 290 aa13.02□□□□□ -0.33
CHMP3-207ENST00000485465 EPDR1Q9UM22 224 aa13.02□□□□□ -0.33
CHMP3-207ENST00000485465 MGAM2Q2M2H8 2515 aa13.02□□□□□ -0.33
CHMP3-207ENST00000485465 A0A0J9YX75 114 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 LOC102723971A0A1B0GUV8 181 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 RBFOX3A6NFN3 312 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 DIRC3C9JPN6 131 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 C11orf94C9JXX5 98 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 ACTL10Q5JWF8 245 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 GDF5OSQ5U4N7 250 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 OR8A1Q8NGG7 326 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 CITED4Q96RK1 184 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 RARRES2Q99969 163 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 TXNDC17Q9BRA2 123 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 AURKAIP1Q9NWT8 199 aaPredicted RBP13.01□□□□□ -0.33
CHMP3-207ENST00000485465 RPH3ALQ9UNE2 315 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 SORL1Q92673 2214 aa13.01□□□□□ -0.33
CHMP3-207ENST00000485465 ZNF705DP0CH99 300 aaPredicted RBP13□□□□□ -0.33
CHMP3-207ENST00000485465 ZNF705BP0CI00 300 aaPredicted RBP13□□□□□ -0.33
CHMP3-207ENST00000485465 FAM210AQ96ND0 272 aa13□□□□□ -0.33
CHMP3-207ENST00000485465 TCEAL7Q9BRU2 100 aa13□□□□□ -0.33
CHMP3-207ENST00000485465 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-207ENST00000485465 H3BMM0 161 aa12.99□□□□□ -0.33
CHMP3-207ENST00000485465 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-207ENST00000485465 PRB2P02812 416 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-207ENST00000485465 TCRAP04437 139 aa12.99□□□□□ -0.33
CHMP3-207ENST00000485465 HLA-DRB4P13762 266 aa12.99□□□□□ -0.33
CHMP3-207ENST00000485465 MEF2BQ02080 365 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-207ENST00000485465 HIST1H1AQ02539 215 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-207ENST00000485465 ZNF506Q5JVG8 444 aa12.99□□□□□ -0.33
CHMP3-207ENST00000485465 GOLT1AQ6ZVE7 132 aa12.99□□□□□ -0.33
CHMP3-207ENST00000485465 OR10J6PQ8NGY7 276 aa12.99□□□□□ -0.33
CHMP3-207ENST00000485465 SRD5A3Q9H8P0 318 aa12.99□□□□□ -0.33
CHMP3-207ENST00000485465 HLA-DRB4X5D2U9 266 aa12.99□□□□□ -0.33
CHMP3-207ENST00000485465 RBAKDNA6NC62 111 aa12.98□□□□□ -0.33
CHMP3-207ENST00000485465 PEX7O00628 323 aa12.98□□□□□ -0.33
CHMP3-207ENST00000485465 DUSP14O95147 198 aaKnown RBP12.98□□□□□ -0.33
CHMP3-207ENST00000485465 TOR2AQ5JU69 321 aa12.98□□□□□ -0.33
CHMP3-207ENST00000485465 STHQ8IWL8 128 aa12.98□□□□□ -0.33
CHMP3-207ENST00000485465 HIST1H2BAQ96A08 127 aa12.98□□□□□ -0.33
CHMP3-207ENST00000485465 ATG101Q9BSB4 218 aa12.98□□□□□ -0.33
CHMP3-207ENST00000485465 EIF5A2Q9GZV4 153 aaKnown RBP12.98□□□□□ -0.33
CHMP3-207ENST00000485465 SERTM2A0A1B0GWG4 89 aa12.97□□□□□ -0.33
CHMP3-207ENST00000485465 NPIPB6E9PJ23 425 aa12.97□□□□□ -0.33
CHMP3-207ENST00000485465 F6UZH7 168 aa12.97□□□□□ -0.33
CHMP3-207ENST00000485465 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
CHMP3-207ENST00000485465 CNN1P51911 297 aaKnown RBP12.97□□□□□ -0.33
CHMP3-207ENST00000485465 ERCC8Q13216 396 aa12.97□□□□□ -0.33
CHMP3-207ENST00000485465 CYB561D1Q8N8Q1 229 aa12.97□□□□□ -0.33
CHMP3-207ENST00000485465 VGLL1Q99990 258 aa12.97□□□□□ -0.33
CHMP3-207ENST00000485465 TUBA4BQ9H853 241 aa12.97□□□□□ -0.33
CHMP3-207ENST00000485465 SCO2A0A1W2PP80 73 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 A8MTW9 85 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 K7EIL1 84 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 K7EQM0 130 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 PDE6DO43924 150 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 C9orf47Q6ZRZ4 202 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 TRPT1Q86TN4 253 aaKnown RBP12.96□□□□□ -0.33
CHMP3-207ENST00000485465 OR4B1Q8NGF8 309 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 CLUHP3Q96NS8 147 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
CHMP3-207ENST00000485465 A8MZ25 164 aa12.95□□□□□ -0.34
CHMP3-207ENST00000485465 IGKV3-20P01619 116 aa12.95□□□□□ -0.34
CHMP3-207ENST00000485465 C11orf52Q96A22 123 aa12.95□□□□□ -0.34
CHMP3-207ENST00000485465 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
CHMP3-207ENST00000485465 NBEAL1Q6ZS30 2694 aa12.95□□□□□ -0.34
CHMP3-207ENST00000485465 RBMY1BA6NDE4 496 aaKnown RBP12.94□□□□□ -0.34
CHMP3-207ENST00000485465 RBMY1EA6NEQ0 496 aaKnown RBP12.94□□□□□ -0.34
CHMP3-207ENST00000485465 RBMY1DP0C7P1 496 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms