RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 WFDC3Q8IUB2 231 aa10.9□□□□□ -0.67
LRIF1-202ENST00000485275 C16orf92Q96LL3 132 aa10.9□□□□□ -0.67
LRIF1-202ENST00000485275 SGK494Q96LW2 274 aa10.9□□□□□ -0.67
LRIF1-202ENST00000485275 NKX6-2Q9C056 277 aaPredicted RBP10.9□□□□□ -0.67
LRIF1-202ENST00000485275 TRAV8-1A0A0A6YYK1 113 aa10.89□□□□□ -0.67
LRIF1-202ENST00000485275 TRAV34A0A0B4J273 112 aa10.89□□□□□ -0.67
LRIF1-202ENST00000485275 NDUFS6O75380 124 aaKnown RBP10.89□□□□□ -0.67
LRIF1-202ENST00000485275 MEOX2P50222 304 aa10.89□□□□□ -0.67
LRIF1-202ENST00000485275 C10orf91Q5T1B1 145 aa10.89□□□□□ -0.67
LRIF1-202ENST00000485275 SHISA2Q6UWI4 295 aa10.89□□□□□ -0.67
LRIF1-202ENST00000485275 AAMDCQ9H7C9 122 aa10.89□□□□□ -0.67
LRIF1-202ENST00000485275 IGKV2-40A0A087WW87 121 aaPredicted RBP10.88□□□□□ -0.67
LRIF1-202ENST00000485275 DIRC3C9JPN6 131 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 TSPAN4O14817 238 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 IGKV2D-40P01614 121 aaPredicted RBP10.88□□□□□ -0.67
LRIF1-202ENST00000485275 IGLV1-51P01701 117 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 ZNF674Q2M3X9 581 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 GOLT1AQ6ZVE7 132 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 ASCL2Q99929 193 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 ATG101Q9BSB4 218 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 PGPEP1LA6NFU8 196 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 F8W036 122 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 ISLRO14498 428 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 IGLV2-11P01706 119 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 RPL35P42766 123 aaKnown RBP10.88□□□□□ -0.67
LRIF1-202ENST00000485275 GUCA2BQ16661 112 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 LCN12Q6JVE5 192 aa10.88□□□□□ -0.67
LRIF1-202ENST00000485275 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
LRIF1-202ENST00000485275 SOHLH1Q5JUK2 328 aa10.87□□□□□ -0.67
LRIF1-202ENST00000485275 CMTM2Q8TAZ6 248 aa10.87□□□□□ -0.67
LRIF1-202ENST00000485275 HIST1H2BAQ96A08 127 aa10.87□□□□□ -0.67
LRIF1-202ENST00000485275 IGF2BP2-AS1Q96M15 143 aa10.87□□□□□ -0.67
LRIF1-202ENST00000485275 TCEAL7Q9BRU2 100 aa10.87□□□□□ -0.67
LRIF1-202ENST00000485275 SEC11CQ9BY50 192 aa10.87□□□□□ -0.67
LRIF1-202ENST00000485275 ZNF256Q9Y2P7 627 aaPredicted RBP10.87□□□□□ -0.67
LRIF1-202ENST00000485275 SORL1Q92673 2214 aa10.86□□□□□ -0.67
LRIF1-202ENST00000485275 F6UB75 175 aa10.86□□□□□ -0.67
LRIF1-202ENST00000485275 PSG3Q16557 428 aa10.86□□□□□ -0.67
LRIF1-202ENST00000485275 RBPMS2Q6ZRY4 209 aaKnown RBP10.86□□□□□ -0.67
LRIF1-202ENST00000485275 SMIM7Q9BQ49 75 aa10.86□□□□□ -0.67
LRIF1-202ENST00000485275 CARHSP1Q9Y2V2 147 aaKnown RBP10.86□□□□□ -0.67
LRIF1-202ENST00000485275 PKD1L1Q8TDX9 2849 aa10.86□□□□□ -0.67
LRIF1-202ENST00000485275 KRBOX1C9JBD0 128 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 ZNF705DP0CH99 300 aaPredicted RBP10.85□□□□□ -0.67
LRIF1-202ENST00000485275 ZNF705BP0CI00 300 aaPredicted RBP10.85□□□□□ -0.67
LRIF1-202ENST00000485275 AKR1C3P42330 323 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 VGLL1Q99990 258 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 KLF12Q9Y4X4 402 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 ZNF727A8MUV8 499 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 DNASE2O00115 360 aaPredicted RBP10.85□□□□□ -0.67
LRIF1-202ENST00000485275 CENPWQ5EE01 88 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 GDF5OSQ5U4N7 250 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 ZNF738Q8NE65 137 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 WFDC9Q8NEX5 89 aa10.85□□□□□ -0.67
LRIF1-202ENST00000485275 MRPL53Q96EL3 112 aaKnown RBP10.85□□□□□ -0.67
LRIF1-202ENST00000485275 NOTCH3Q9UM47 2321 aa10.84□□□□□ -0.67
LRIF1-202ENST00000485275 IGLV2-8P01709 118 aa10.84□□□□□ -0.67
LRIF1-202ENST00000485275 ERCC8Q13216 396 aa10.84□□□□□ -0.67
LRIF1-202ENST00000485275 ZNF124Q15973 351 aa10.84□□□□□ -0.67
LRIF1-202ENST00000485275 TMEM183BQ1AE95 376 aa10.84□□□□□ -0.67
LRIF1-202ENST00000485275 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
LRIF1-202ENST00000485275 Q86TA4 180 aa10.84□□□□□ -0.67
LRIF1-202ENST00000485275 Q8TAT8 98 aa10.84□□□□□ -0.67
LRIF1-202ENST00000485275 SPAG8Q99932 426 aaPredicted RBP10.84□□□□□ -0.67
LRIF1-202ENST00000485275 AURKAIP1Q9NWT8 199 aaPredicted RBP10.84□□□□□ -0.67
LRIF1-202ENST00000485275 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
LRIF1-202ENST00000485275 TRAV25A0A0B4J276 109 aa10.83□□□□□ -0.68
LRIF1-202ENST00000485275 APOC3P02656 99 aa10.83□□□□□ -0.68
LRIF1-202ENST00000485275 TMEM75Q8N9X5 138 aa10.83□□□□□ -0.68
LRIF1-202ENST00000485275 NHLRC2Q8NBF2 726 aa10.83□□□□□ -0.68
LRIF1-202ENST00000485275 TVP23CQ96ET8 276 aa10.83□□□□□ -0.68
LRIF1-202ENST00000485275 PRELID1Q9Y255 219 aa10.83□□□□□ -0.68
LRIF1-202ENST00000485275 IGLL1P15814 213 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 CD33P20138 364 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 CSN1S1P47710 185 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 CNN1P51911 297 aaKnown RBP10.82□□□□□ -0.68
LRIF1-202ENST00000485275 ODF3L2Q3SX64 289 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 ARL6IP6Q8N6S5 226 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 GPR61Q9BZJ8 451 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 MAP6D1Q9H9H5 199 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 DNHD1Q96M86 4753 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 AGRNO00468 2067 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 C9JCJ5 164 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 K7EN84 100 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 LTAP01374 205 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 ID1P41134 155 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 PAFAH1B2P68402 229 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 FMC1Q96HJ9 113 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 SDF2L1Q9HCN8 221 aa10.82□□□□□ -0.68
LRIF1-202ENST00000485275 SNRPD3P62318 126 aaKnown RBP10.81□□□□□ -0.68
LRIF1-202ENST00000485275 RPL23P62829 140 aaKnown RBP10.81□□□□□ -0.68
LRIF1-202ENST00000485275 FLI1Q01543 452 aaPredicted RBP10.81□□□□□ -0.68
LRIF1-202ENST00000485275 SAMD13Q5VXD3 122 aa10.81□□□□□ -0.68
LRIF1-202ENST00000485275 ATRAIDQ6UW56 229 aa10.81□□□□□ -0.68
LRIF1-202ENST00000485275 PRNTQ86SH4 94 aa10.81□□□□□ -0.68
LRIF1-202ENST00000485275 LINC01551Q86U37 167 aa10.81□□□□□ -0.68
LRIF1-202ENST00000485275 NIPSNAP3BQ9BS92 247 aa10.81□□□□□ -0.68
LRIF1-202ENST00000485275 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
LRIF1-202ENST00000485275 CLEC5AQ9NY25 188 aa10.81□□□□□ -0.68
LRIF1-202ENST00000485275 PSG8Q9UQ74 426 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms