RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 AKR1C3P42330 323 aa13.14□□□□□ -0.31
CCDC78-214ENST00000485091 CSN1S1P47710 185 aa13.14□□□□□ -0.31
CCDC78-214ENST00000485091 GOLT1AQ6ZVE7 132 aa13.14□□□□□ -0.31
CCDC78-214ENST00000485091 C11orf52Q96A22 123 aa13.14□□□□□ -0.31
CCDC78-214ENST00000485091 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
CCDC78-214ENST00000485091 TENM1Q9UKZ4 2725 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 ZNF727A8MUV8 499 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 PAFAH1B2P68402 229 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 LCN12Q6JVE5 192 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 SHISA2Q6UWI4 295 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 FAM24BQ8N5W8 94 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 DCANP1Q8TF63 244 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 SMIM7Q9BQ49 75 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 SEC11CQ9BY50 192 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 DIRC3C9JPN6 131 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 APOC3P02656 99 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 ATG101Q9BSB4 218 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 SIGLEC8Q9NYZ4 499 aa13.13□□□□□ -0.31
CCDC78-214ENST00000485091 DNHD1Q96M86 4753 aa13.12□□□□□ -0.31
CCDC78-214ENST00000485091 PRAC2D3DTV9 90 aa13.12□□□□□ -0.31
CCDC78-214ENST00000485091 NDUFS6O75380 124 aaKnown RBP13.12□□□□□ -0.31
CCDC78-214ENST00000485091 ZNF688P0C7X2 276 aa13.12□□□□□ -0.31
CCDC78-214ENST00000485091 RPL35P42766 123 aaKnown RBP13.12□□□□□ -0.31
CCDC78-214ENST00000485091 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
CCDC78-214ENST00000485091 PSG3Q16557 428 aa13.12□□□□□ -0.31
CCDC78-214ENST00000485091 ZNF738Q8NE65 137 aa13.12□□□□□ -0.31
CCDC78-214ENST00000485091 C2CD4CQ8TF44 421 aa13.12□□□□□ -0.31
CCDC78-214ENST00000485091 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-214ENST00000485091 K7EQG2 157 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 ISLRO14498 428 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 TSPAN4O14817 238 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-214ENST00000485091 S100A1P23297 94 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 ID1P41134 155 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 DEFB1P60022 68 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 GUCA2BQ16661 112 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 TCEAL7Q9BRU2 100 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 PRELID1Q9Y255 219 aa13.11□□□□□ -0.31
CCDC78-214ENST00000485091 TRAV8-1A0A0A6YYK1 113 aa13.1□□□□□ -0.31
CCDC78-214ENST00000485091 UBE2G1P62253 170 aa13.1□□□□□ -0.31
CCDC78-214ENST00000485091 ASCL2Q99929 193 aa13.1□□□□□ -0.31
CCDC78-214ENST00000485091 PGPEP1LA6NFU8 196 aa13.1□□□□□ -0.31
CCDC78-214ENST00000485091 CD33P20138 364 aa13.1□□□□□ -0.31
CCDC78-214ENST00000485091 PSMG4Q5JS54 123 aa13.1□□□□□ -0.31
CCDC78-214ENST00000485091 AURKAIP1Q9NWT8 199 aaPredicted RBP13.1□□□□□ -0.31
CCDC78-214ENST00000485091 ZNF705DP0CH99 300 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-214ENST00000485091 ZNF705BP0CI00 300 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-214ENST00000485091 C10orf91Q5T1B1 145 aa13.09□□□□□ -0.31
CCDC78-214ENST00000485091 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
CCDC78-214ENST00000485091 CLEC5AQ9NY25 188 aa13.09□□□□□ -0.31
CCDC78-214ENST00000485091 STAB1Q9NY15 2570 aa13.09□□□□□ -0.31
CCDC78-214ENST00000485091 K7EQM0 130 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
CCDC78-214ENST00000485091 ERCC8Q13216 396 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 CENPWQ5EE01 88 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 SAMD13Q5VXD3 122 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 PRNTQ86SH4 94 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 CARHSP1Q9Y2V2 147 aaKnown RBP13.08□□□□□ -0.32
CCDC78-214ENST00000485091 TRBV20OR9-2A0A075B6H5 130 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 F6UB75 175 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 IGLV1-51P01701 117 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 GNG4P50150 75 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 TMEM183BQ1AE95 376 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 TMEM241Q24JQ0 296 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 FAM74A3Q4VXF1 159 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 NHLRC2Q8NBF2 726 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
CCDC78-214ENST00000485091 VGLL1Q99990 258 aa13.08□□□□□ -0.32
CCDC78-214ENST00000485091 TRAV25A0A0B4J276 109 aa13.07□□□□□ -0.32
CCDC78-214ENST00000485091 FMC1Q96HJ9 113 aa13.07□□□□□ -0.32
CCDC78-214ENST00000485091 NAT8Q9UHE5 227 aa13.07□□□□□ -0.32
CCDC78-214ENST00000485091 OR4C46A6NHA9 309 aa13.06□□□□□ -0.32
CCDC78-214ENST00000485091 M0R036 132 aa13.06□□□□□ -0.32
CCDC78-214ENST00000485091 TAS2R60P59551 318 aa13.06□□□□□ -0.32
CCDC78-214ENST00000485091 ADIRFQ15847 76 aa13.06□□□□□ -0.32
CCDC78-214ENST00000485091 C9orf66Q5T8R8 295 aa13.06□□□□□ -0.32
CCDC78-214ENST00000485091 TMEM75Q8N9X5 138 aa13.06□□□□□ -0.32
CCDC78-214ENST00000485091 TVP23CQ96ET8 276 aa13.06□□□□□ -0.32
CCDC78-214ENST00000485091 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
CCDC78-214ENST00000485091 PSG8Q9UQ74 426 aa13.06□□□□□ -0.32
CCDC78-214ENST00000485091 IGLV2-11P01706 119 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 FLI1Q01543 452 aaPredicted RBP13.05□□□□□ -0.32
CCDC78-214ENST00000485091 BAGE2Q86Y30 109 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 ARL6IP6Q8N6S5 226 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 Q8TAT8 98 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 IGF2BP2-AS1Q96M15 143 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 SDF2L1Q9HCN8 221 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 KLF12Q9Y4X4 402 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 SERTM2A0A1B0GWG4 89 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 IGLL1P15814 213 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 DEFB131AP59861 70 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 HIST1H1AQ02539 215 aaPredicted RBP13.05□□□□□ -0.32
CCDC78-214ENST00000485091 Q86TA4 180 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 OCC1Q8TAD7 63 aa13.05□□□□□ -0.32
CCDC78-214ENST00000485091 ZNF256Q9Y2P7 627 aaPredicted RBP13.05□□□□□ -0.32
CCDC78-214ENST00000485091 TRAV2A0A0B4J234 112 aa13.04□□□□□ -0.32
CCDC78-214ENST00000485091 S100A9P06702 114 aaKnown RBP13.04□□□□□ -0.32
CCDC78-214ENST00000485091 MGST1P10620 155 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms