RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 TRAV12-2A0A075B6T6 113 aa13.81□□□□□ -0.2
SNX17-206ENST00000484886 SMIM9A6NGZ8 99 aa13.81□□□□□ -0.2
SNX17-206ENST00000484886 HBE1P02100 147 aa13.81□□□□□ -0.2
SNX17-206ENST00000484886 PDE6HQ13956 83 aa13.81□□□□□ -0.2
SNX17-206ENST00000484886 ACOT6Q3I5F7 207 aaPredicted RBP13.81□□□□□ -0.2
SNX17-206ENST00000484886 HSD17B11Q8NBQ5 300 aa13.81□□□□□ -0.2
SNX17-206ENST00000484886 NEU1Q99519 415 aa13.81□□□□□ -0.2
SNX17-206ENST00000484886 TENM2Q9NT68 2774 aa13.81□□□□□ -0.2
SNX17-206ENST00000484886 KMT2CQ8NEZ4 4911 aaKnown RBP13.8□□□□□ -0.2
SNX17-206ENST00000484886 JTBO76095 146 aa13.8□□□□□ -0.2
SNX17-206ENST00000484886 NBEAP1P0C6P0 100 aa13.8□□□□□ -0.2
SNX17-206ENST00000484886 TAS2R45P59539 299 aa13.8□□□□□ -0.2
SNX17-206ENST00000484886 KHDC3LQ587J8 217 aa13.8□□□□□ -0.2
SNX17-206ENST00000484886 C1orf158Q8N1D5 194 aa13.8□□□□□ -0.2
SNX17-206ENST00000484886 EXOC3-AS1Q8N2X6 119 aa13.8□□□□□ -0.2
SNX17-206ENST00000484886 A0A1W2PPV4 95 aa13.79□□□□□ -0.2
SNX17-206ENST00000484886 M0R3E3 92 aa13.79□□□□□ -0.2
SNX17-206ENST00000484886 NDUFB4O95168 129 aa13.79□□□□□ -0.2
SNX17-206ENST00000484886 UBE2L3P68036 154 aaKnown RBP13.79□□□□□ -0.2
SNX17-206ENST00000484886 RNF141Q8WVD5 230 aa13.79□□□□□ -0.2
SNX17-206ENST00000484886 MRPL53Q96EL3 112 aaKnown RBP13.79□□□□□ -0.2
SNX17-206ENST00000484886 PRELID1Q9Y255 219 aa13.79□□□□□ -0.2
SNX17-206ENST00000484886 LCE6AA0A183 80 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 TMEM189A5PLL7 270 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 M6PRP20645 277 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 TSPOP30536 169 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 RAB2AP61019 212 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 ICAM4Q14773 271 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 RRN3P1Q2M238 152 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 FXYD5Q96DB9 178 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 TNFSF18Q9UNG2 199 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 CELA1Q9UNI1 258 aa13.78□□□□□ -0.2
SNX17-206ENST00000484886 BORCS7-ASMTA0A0B4J1R7 106 aa13.77□□□□□ -0.21
SNX17-206ENST00000484886 LOC102723971A0A1B0GUV8 181 aa13.77□□□□□ -0.21
SNX17-206ENST00000484886 CRXO43186 299 aaPredicted RBP13.77□□□□□ -0.21
SNX17-206ENST00000484886 EIF3GO75821 320 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNX17-206ENST00000484886 CDKN1BP46527 198 aa13.77□□□□□ -0.21
SNX17-206ENST00000484886 ZNF767PQ75MW2 155 aa13.77□□□□□ -0.21
SNX17-206ENST00000484886 RPP25LQ8N5L8 163 aaKnown RBP13.77□□□□□ -0.21
SNX17-206ENST00000484886 OR10G4Q8NGN3 311 aa13.77□□□□□ -0.21
SNX17-206ENST00000484886 OR10G9Q8NGN4 311 aa13.77□□□□□ -0.21
SNX17-206ENST00000484886 OR10G7Q8NGN6 311 aa13.77□□□□□ -0.21
SNX17-206ENST00000484886 LINC01587Q99440 93 aa13.77□□□□□ -0.21
SNX17-206ENST00000484886 RNF222A6NCQ9 220 aa13.76□□□□□ -0.21
SNX17-206ENST00000484886 J3KRW8 73 aa13.76□□□□□ -0.21
SNX17-206ENST00000484886 ATP6V0CP27449 155 aa13.76□□□□□ -0.21
SNX17-206ENST00000484886 PHYHIPLQ96FC7 376 aa13.76□□□□□ -0.21
SNX17-206ENST00000484886 ZNF705GA8MUZ8 300 aaPredicted RBP13.75□□□□□ -0.21
SNX17-206ENST00000484886 NPIPB6E9PJ23 425 aa13.75□□□□□ -0.21
SNX17-206ENST00000484886 SMLR1H3BR10 107 aa13.75□□□□□ -0.21
SNX17-206ENST00000484886 ARPC5O15511 151 aa13.75□□□□□ -0.21
SNX17-206ENST00000484886 SPART-AS1P0CW21 52 aa13.75□□□□□ -0.21
SNX17-206ENST00000484886 HTN1P15515 57 aa13.75□□□□□ -0.21
SNX17-206ENST00000484886 LEPP41159 167 aa13.75□□□□□ -0.21
SNX17-206ENST00000484886 RANP62826 216 aaKnown RBP13.75□□□□□ -0.21
SNX17-206ENST00000484886 Q6ZTC4 211 aa13.75□□□□□ -0.21
SNX17-206ENST00000484886 PSMG3Q9BT73 122 aaPredicted RBP13.75□□□□□ -0.21
SNX17-206ENST00000484886 C11orf94C9JXX5 98 aa13.74□□□□□ -0.21
SNX17-206ENST00000484886 HMGB3O15347 200 aaKnown RBP13.74□□□□□ -0.21
SNX17-206ENST00000484886 CT45A10P0DMU9 189 aa13.74□□□□□ -0.21
SNX17-206ENST00000484886 ERCC8Q13216 396 aa13.74□□□□□ -0.21
SNX17-206ENST00000484886 RPL7L1Q6DKI1 246 aaKnown RBP13.74□□□□□ -0.21
SNX17-206ENST00000484886 TMEM256Q8N2U0 113 aa13.74□□□□□ -0.21
SNX17-206ENST00000484886 OR2G3Q8NGZ4 309 aa13.74□□□□□ -0.21
SNX17-206ENST00000484886 C2CD4CQ8TF44 421 aa13.74□□□□□ -0.21
SNX17-206ENST00000484886 ZNF503Q96F45 646 aa13.74□□□□□ -0.21
SNX17-206ENST00000484886 SH3BGRL3Q9H299 93 aa13.74□□□□□ -0.21
SNX17-206ENST00000484886 DYNC2H1Q8NCM8 4307 aaKnown RBP13.73□□□□□ -0.21
SNX17-206ENST00000484886 IGKV2-40A0A087WW87 121 aaPredicted RBP13.73□□□□□ -0.21
SNX17-206ENST00000484886 G3V3Q6 166 aa13.73□□□□□ -0.21
SNX17-206ENST00000484886 IGKV2D-40P01614 121 aaPredicted RBP13.73□□□□□ -0.21
SNX17-206ENST00000484886 CSN1S1P47710 185 aa13.73□□□□□ -0.21
SNX17-206ENST00000484886 CDC34P49427 236 aaPredicted RBP13.73□□□□□ -0.21
SNX17-206ENST00000484886 Q9H3A6 140 aa13.73□□□□□ -0.21
SNX17-206ENST00000484886 YTHDF2Q9Y5A9 579 aaKnown RBP13.73□□□□□ -0.21
SNX17-206ENST00000484886 TRAV10A0A0B4J240 114 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 TEX48A0A1B0GUV7 120 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 MBP02144 154 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 PRM2P04554 102 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 SERF2P84101 59 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 KIR3DS1Q14943 382 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 C12orf74Q32Q52 190 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 FAM222AQ5U5X8 452 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 PQLC2Q6ZP29 291 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 GNPNAT1Q96EK6 184 aaPredicted RBP13.72□□□□□ -0.21
SNX17-206ENST00000484886 ODF3Q96PU9 254 aa13.72□□□□□ -0.21
SNX17-206ENST00000484886 IGLL5B9A064 214 aa13.71□□□□□ -0.21
SNX17-206ENST00000484886 TMEM78Q5T7P6 136 aa13.71□□□□□ -0.21
SNX17-206ENST00000484886 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.21
SNX17-206ENST00000484886 LYPD1Q8N2G4 141 aa13.71□□□□□ -0.21
SNX17-206ENST00000484886 HYLS1Q96M11 299 aa13.71□□□□□ -0.21
SNX17-206ENST00000484886 LINC00477Q96M19 166 aa13.71□□□□□ -0.21
SNX17-206ENST00000484886 DKK2Q9UBU2 259 aa13.71□□□□□ -0.21
SNX17-206ENST00000484886 H7BYZ3 331 aa13.7□□□□□ -0.22
SNX17-206ENST00000484886 TAAR5O14804 337 aa13.7□□□□□ -0.22
SNX17-206ENST00000484886 ARL14EPLP0DKL9 152 aa13.7□□□□□ -0.22
SNX17-206ENST00000484886 TAS2R60P59551 318 aa13.7□□□□□ -0.22
SNX17-206ENST00000484886 AGPAT4-IT1Q9H0P7 198 aa13.7□□□□□ -0.22
SNX17-206ENST00000484886 RPH3ALQ9UNE2 315 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms