RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 H0YJW9 148 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 LINC01356Q8N9X3 169 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 MBD3L2Q8NHZ7 208 aaPredicted RBP12.25□□□□□ -0.45
RXRA-203ENST00000484822 AZU1P20160 251 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 UBE2DNLQ8IWF7 75 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 PPDPFLQ8WWR9 84 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 CACNA1BQ00975 2339 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 EP400Q96L91 3159 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 GFRA4Q9GZZ7 299 aa12.25□□□□□ -0.45
RXRA-203ENST00000484822 IGHV1-3A0A0C4DH29 117 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 COX8AP10176 69 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 VWC2Q2TAL6 325 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 TIMM21Q9BVV7 248 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 A0A087WWL8 130 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 NSUN5P1Q3KNT7 163 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 C1orf159Q96HA4 380 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 V9GYV3 84 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 H3BMG7 143 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 TCF15Q12870 199 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 NCOR1P1Q9H4R4 102 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 MYO7BQ6PIF6 2116 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 F8W1H4 67 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 H3BMM0 161 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 AMTNQ6UX39 209 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 UBE2WQ96B02 151 aa12.24□□□□□ -0.45
RXRA-203ENST00000484822 ZNF688P0C7X2 276 aa12.23□□□□□ -0.45
RXRA-203ENST00000484822 A0A1W2PPM0 123 aa12.23□□□□□ -0.45
RXRA-203ENST00000484822 RCHY1Q96PM5 261 aa12.23□□□□□ -0.45
RXRA-203ENST00000484822 ERCC8Q13216 396 aa12.23□□□□□ -0.45
RXRA-203ENST00000484822 ASPHD1Q5U4P2 390 aa12.23□□□□□ -0.45
RXRA-203ENST00000484822 LYPD1Q8N2G4 141 aa12.23□□□□□ -0.45
RXRA-203ENST00000484822 NUP210Q8TEM1 1887 aaPredicted RBP12.22□□□□□ -0.45
RXRA-203ENST00000484822 K7ERJ3 54 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 MINOS1Q5TGZ0 78 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 RASL10AQ92737 203 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 SRSF8Q9BRL6 282 aaKnown RBP12.22□□□□□ -0.45
RXRA-203ENST00000484822 MINOS1-NBL1R4GNA1 71 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 CFPP27918 469 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 DEFB121Q5J5C9 76 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 FAM104BQ5XKR9 115 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 TRAV13-1A0A0B4J241 112 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 ZNF672Q499Z4 452 aaPredicted RBP12.22□□□□□ -0.45
RXRA-203ENST00000484822 HAPLN4Q86UW8 402 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 TMEM190Q8WZ59 177 aa12.22□□□□□ -0.45
RXRA-203ENST00000484822 MYMXA0A1B0GTQ4 84 aa12.21□□□□□ -0.45
RXRA-203ENST00000484822 CEACAM8P31997 349 aaPredicted RBP12.21□□□□□ -0.45
RXRA-203ENST00000484822 MORN5Q5VZ52 161 aa12.21□□□□□ -0.45
RXRA-203ENST00000484822 VOPP1Q96AW1 172 aa12.21□□□□□ -0.45
RXRA-203ENST00000484822 TRAV41A0A0B4J266 112 aa12.21□□□□□ -0.45
RXRA-203ENST00000484822 FCN3O75636 299 aa12.21□□□□□ -0.45
RXRA-203ENST00000484822 KLRD1Q13241 179 aa12.21□□□□□ -0.45
RXRA-203ENST00000484822 DOCK7Q96N67 2140 aa12.21□□□□□ -0.45
RXRA-203ENST00000484822 TRBV20-1A0A075B6N2 111 aa12.21□□□□□ -0.46
RXRA-203ENST00000484822 C9orf139Q6ZV77 190 aa12.21□□□□□ -0.46
RXRA-203ENST00000484822 SIGLEC9Q9Y336 463 aa12.21□□□□□ -0.46
RXRA-203ENST00000484822 TTC28Q96AY4 2481 aa12.21□□□□□ -0.46
RXRA-203ENST00000484822 IGKV1D-17A0A075B6S4 117 aa12.21□□□□□ -0.46
RXRA-203ENST00000484822 TMEM219Q86XT9 240 aa12.21□□□□□ -0.46
RXRA-203ENST00000484822 C1orf147Q96MC9 270 aaPredicted RBP12.21□□□□□ -0.46
RXRA-203ENST00000484822 E9PQ18 207 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
RXRA-203ENST00000484822 RNF166Q96A37 237 aaPredicted RBP12.2□□□□□ -0.46
RXRA-203ENST00000484822 LEPROTO15243 131 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 C2orf66Q6UXQ4 117 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 PIP4P1Q86T03 277 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 LY6G5BQ8NDX9 201 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 ZNF492Q9P255 531 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 C3orf36Q3SXR2 165 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 FNDC10F2Z333 226 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 ZNF407Q9C0G0 2248 aa12.2□□□□□ -0.46
RXRA-203ENST00000484822 PLXNA2O75051 1894 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 A0A0G2JNJ9 132 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 Q9UFV3 132 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 COL6A6A6NMZ7 2263 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 CCL25O15444 150 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 C8orf49Q96NF6 230 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 ZNRD1Q9P1U0 126 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 MMP23AO75900 390 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 IGHV3-53P01767 116 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 IFITM1P13164 125 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 IGFL3Q6UXB1 125 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 LINC00477Q96M19 166 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 TP53TG1Q9Y2A0 90 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 DTX1Q86Y01 620 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 SPANXA1Q9NS26 97 aa12.19□□□□□ -0.46
RXRA-203ENST00000484822 FOXL2NBQ6ZUU3 175 aa12.18□□□□□ -0.46
RXRA-203ENST00000484822 SHANK2-AS3Q9BTD1 123 aa12.18□□□□□ -0.46
RXRA-203ENST00000484822 KLF2Q9Y5W3 355 aaPredicted RBP12.18□□□□□ -0.46
RXRA-203ENST00000484822 IGKV1-39P01597 117 aa12.18□□□□□ -0.46
RXRA-203ENST00000484822 IGKV1D-39P04432 117 aa12.18□□□□□ -0.46
RXRA-203ENST00000484822 CDKN1BP46527 198 aa12.18□□□□□ -0.46
RXRA-203ENST00000484822 C5orf64Q2M2E5 130 aa12.18□□□□□ -0.46
RXRA-203ENST00000484822 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
RXRA-203ENST00000484822 A0A1W2PPI3 338 aa12.18□□□□□ -0.46
RXRA-203ENST00000484822 FGF6P10767 208 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms