RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZNF833PQ6ZTB9 187 aa1.8□□□□□ -2.12
VPS13A-211ENST00000484581 ARPINQ7Z6K5 226 aa1.8□□□□□ -2.12
VPS13A-211ENST00000484581 LRRC18Q8N456 261 aa1.8□□□□□ -2.12
VPS13A-211ENST00000484581 U3KQ87 197 aa1.8□□□□□ -2.12
VPS13A-211ENST00000484581 KDM6AO15550 1401 aaPredicted RBP1.8□□□□□ -2.12
VPS13A-211ENST00000484581 TNS3Q68CZ2 1445 aa1.8□□□□□ -2.12
VPS13A-211ENST00000484581 KIAA1107Q9UPP5 1409 aa1.8□□□□□ -2.12
VPS13A-211ENST00000484581 ZNF736B4DX44 427 aaPredicted RBP1.79□□□□□ -2.12
VPS13A-211ENST00000484581 TNFSF15O95150 251 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 FABP4P15090 132 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 SDC4P31431 198 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 S100A12P80511 92 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 CIRBPQ14011 172 aaKnown RBP1.79□□□□□ -2.12
VPS13A-211ENST00000484581 SMCO1Q147U7 214 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 KRTAP26-1Q6PEX3 210 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 MORN4Q8NDC4 146 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 NAT14Q8WUY8 206 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 NIT2Q9NQR4 276 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 GSKIPQ9P0R6 139 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 KLK9Q9UKQ9 250 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 TPRKBQ9Y3C4 175 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 OVOS2A0A0G2JMS6 1433 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 POLEQ07864 2286 aa1.79□□□□□ -2.12
VPS13A-211ENST00000484581 CHD3Q12873 2000 aaKnown RBP1.78□□□□□ -2.12
VPS13A-211ENST00000484581 TNRC6AQ8NDV7 1962 aaKnown RBP1.78□□□□□ -2.12
VPS13A-211ENST00000484581 CCDC160A6NGH7 325 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 C9JAW5 83 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 DPM2O94777 84 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 CXCL8P10145 99 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 TPT1P13693 172 aaKnown RBP1.78□□□□□ -2.12
VPS13A-211ENST00000484581 CRYGSP22914 178 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 CMPK1P30085 196 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 FOXA3P55318 350 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-211ENST00000484581 Q5XG85 94 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 TMEM14EPQ6UXP3 125 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 OR5A2Q8NGI9 324 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 ZNF431Q8TF32 576 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-211ENST00000484581 LZICQ8WZA0 190 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 GGACTQ9BVM4 153 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 HIGD1AQ9Y241 93 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 SNURFQ9Y675 71 aa1.78□□□□□ -2.12
VPS13A-211ENST00000484581 SORL1Q92673 2214 aa1.78□□□□□ -2.13
VPS13A-211ENST00000484581 LAMB2P55268 1798 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 MED23Q9ULK4 1368 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 C5orf58C9J3I9 102 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 CCL16O15467 120 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 CD2P06729 351 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 MORN2Q502X0 79 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 TCTE3Q8IZS6 198 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 OR51A4Q8NGJ6 313 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 Q8TAT8 98 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 BRK1Q8WUW1 75 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 PATE1Q8WXA2 126 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 PSMF1Q92530 271 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 OR4C12Q96R67 309 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 LAMB4A4D0S4 1761 aa1.77□□□□□ -2.13
VPS13A-211ENST00000484581 TCOF1Q13428 1488 aaKnown RBP1.76□□□□□ -2.13
VPS13A-211ENST00000484581 FANCMQ8IYD8 2048 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 PTPRFP10586 1907 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 RFX7Q2KHR2 1363 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 MGAMO43451 1857 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 VIRMAQ69YN4 1812 aaKnown RBP1.76□□□□□ -2.13
VPS13A-211ENST00000484581 IGKV3D-7A0A0C4DH55 119 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 IGKV3OR2-268A0A0C4DH90 116 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 CKS1BP61024 79 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 MAXP61244 160 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 OR5AS1Q8N127 324 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 CEP152O94986 1710 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 DLC1Q96QB1 1528 aa1.76□□□□□ -2.13
VPS13A-211ENST00000484581 FAM135BQ49AJ0 1406 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 LOC110117498A0A087WWA1 95 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.75□□□□□ -2.13
VPS13A-211ENST00000484581 A0A1B0GW64 132 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 M0QZK8 103 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 HCRTO43612 131 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 OR2H2O95918 312 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 PAEPP09466 180 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 SAA1P0DJI8 122 aaPredicted RBP1.75□□□□□ -2.13
VPS13A-211ENST00000484581 DEFB115Q30KQ5 88 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 LINC00052Q96N35 136 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 TMEM138Q9NPI0 162 aa1.75□□□□□ -2.13
VPS13A-211ENST00000484581 MYO18AQ92614 2054 aaKnown RBP1.75□□□□□ -2.13
VPS13A-211ENST00000484581 COL24A1Q17RW2 1714 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 COL4A1P02462 1669 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 C5orf67F2Z3F1 127 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 M0R2N4 97 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 UQCRQO14949 82 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 TRACP01848 142 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 LSM3P62310 102 aaKnown RBP1.74□□□□□ -2.13
VPS13A-211ENST00000484581 SARNPP82979 210 aaKnown RBP1.74□□□□□ -2.13
VPS13A-211ENST00000484581 FAM74A1Q5RGS3 127 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 TMEM244Q5VVB8 128 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 HAGHLQ6PII5 290 aaPredicted RBP1.74□□□□□ -2.13
VPS13A-211ENST00000484581 LINC00269Q8N2A0 174 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 DEFB119Q8N690 84 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 OR10AG1Q8NH19 301 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 BORCS5Q969J3 196 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 CST11Q9H112 138 aa1.74□□□□□ -2.13
VPS13A-211ENST00000484581 CDC42SE1Q9NRR8 79 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms