RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.11□□□□□ -1.43
DDX39B-221ENST00000484566 TMEM268Q5VZI3 342 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 ZNF705AQ6ZN79 300 aaPredicted RBP6.11□□□□□ -1.43
DDX39B-221ENST00000484566 ZNF738Q8NE65 137 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 HIST1H2BHQ93079 126 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 RPUSD4Q96CM3 377 aaKnown RBP6.11□□□□□ -1.43
DDX39B-221ENST00000484566 ACY3Q96HD9 319 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 SLC35E1Q96K37 410 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 ABHD1Q96SE0 405 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 HIST1H2BNQ99877 126 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 HIST1H2BMQ99879 126 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 GINS3Q9BRX5 216 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 MS4A6AQ9H2W1 248 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 CLEC5AQ9NY25 188 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 RAB22AQ9UL26 194 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 AK6Q9Y3D8 172 aaKnown RBP6.11□□□□□ -1.43
DDX39B-221ENST00000484566 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 NACAE9PAV3 2078 aa6.11□□□□□ -1.43
DDX39B-221ENST00000484566 IGKV1D-8A0A087WSZ0 117 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 IGKV1D-13A0A0B4J2D9 117 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 B4DEV8 164 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 UPK2O00526 184 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 ST8SIA3O43173 380 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 HPRT1P00492 218 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 IGLV2-14P01704 120 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 SERPINE2P07093 398 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 IGKV1-13P0DP09 117 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 TAS2R31P59538 309 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 RAB11AP62491 216 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 CYCSP99999 105 aaKnown RBP6.1□□□□□ -1.43
DDX39B-221ENST00000484566 SSBP1Q04837 148 aaKnown RBP6.1□□□□□ -1.43
DDX39B-221ENST00000484566 CATR1Q13166 79 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 COA6Q5JTJ3 125 aaKnown RBP6.1□□□□□ -1.43
DDX39B-221ENST00000484566 UBE2NLQ5JXB2 153 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 FAM90A2PQ658T7 463 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 SFXN4Q6P4A7 337 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 DHRS11Q6UWP2 260 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 TRPT1Q86TN4 253 aaKnown RBP6.1□□□□□ -1.43
DDX39B-221ENST00000484566 OR10W1Q8NGF6 305 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 LSM10Q969L4 123 aaKnown RBP6.1□□□□□ -1.43
DDX39B-221ENST00000484566 OR10C1Q96KK4 312 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 TMEM56Q96MV1 263 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 GFI1Q99684 422 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 TMEM140Q9NV12 185 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 RABAC1Q9UI14 185 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 FLVCR2Q9UPI3 526 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 F11RQ9Y624 299 aaKnown RBP6.1□□□□□ -1.43
DDX39B-221ENST00000484566 TMEM56-RWDD3S4R434 201 aa6.1□□□□□ -1.43
DDX39B-221ENST00000484566 TRAV1-2A0A0B4J238 106 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 TRAV3A0A0B4J244 114 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 TMEM235A6NFC5 223 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 B5MCH6 92 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 K7EIM0 57 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 RBFOX2O43251 390 aaKnown RBP eCLIP6.09□□□□□ -1.43
DDX39B-221ENST00000484566 TNFSF12O43508 249 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 CTSGP08311 255 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 GIG44P09565 113 aaPredicted RBP6.09□□□□□ -1.43
DDX39B-221ENST00000484566 INAFM2P0DMQ5 153 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 AKR1C3P42330 323 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 RPL29P47914 159 aaKnown RBP6.09□□□□□ -1.43
DDX39B-221ENST00000484566 H2BFSP57053 126 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 BRWD1-AS2P59051 145 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 WT1-ASQ06250 92 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 EIF4EBP1Q13541 118 aaPredicted RBP6.09□□□□□ -1.43
DDX39B-221ENST00000484566 OCIAD2Q56VL3 154 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 STEAP1BQ6NZ63 245 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 OR1L8Q8NGR8 309 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 SCRT1Q9BWW7 348 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 HINT2Q9BX68 163 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 MAGT1Q9H0U3 335 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 TMEM231Q9H6L2 316 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 OR5AC2Q9NZP5 309 aa6.09□□□□□ -1.43
DDX39B-221ENST00000484566 UMAD1C9J7I0 102 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 SPART-AS1P0CW21 52 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 SULT1A2P50226 295 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 MFAP4P55083 255 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 ERVK-16P61578 105 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 MEF2DQ14814 521 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 POU2AF1Q16633 256 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 TMEM183BQ1AE95 376 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 PRR27Q6MZM9 219 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 STXBP6Q8NFX7 210 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 OR1P1Q8NH06 330 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 SECTM1Q8WVN6 248 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 ISOC2Q96AB3 205 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 MOB3AQ96BX8 217 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 ZNF414Q96IQ9 312 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 ZNF479Q96JC4 524 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 C18orf15Q96N68 181 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 SLC25A21Q9BQT8 299 aaPredicted RBP6.08□□□□□ -1.44
DDX39B-221ENST00000484566 C1QTNF4Q9BXJ3 329 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 SLC35B3Q9H1N7 401 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 V9GY05 133 aa6.08□□□□□ -1.44
DDX39B-221ENST00000484566 IGHV3-66A0A0C4DH42 116 aa6.07□□□□□ -1.44
DDX39B-221ENST00000484566 TEX48A0A1B0GUV7 120 aa6.07□□□□□ -1.44
DDX39B-221ENST00000484566 TMEM189A5PLL7 270 aa6.07□□□□□ -1.44
DDX39B-221ENST00000484566 KNCNA6PVL3 124 aa6.07□□□□□ -1.44
DDX39B-221ENST00000484566 EPM2AB3EWF7 344 aa6.07□□□□□ -1.44
DDX39B-221ENST00000484566 CCL25O15444 150 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms