RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 SLC25A39Q9BZJ4 359 aaPredicted RBP3.29□□□□□ -1.88
SPTA1-206ENST00000484520 OR51M1Q9H341 326 aa3.29□□□□□ -1.88
SPTA1-206ENST00000484520 VSIRQ9H7M9 311 aa3.29□□□□□ -1.88
SPTA1-206ENST00000484520 GNB4Q9HAV0 340 aa3.29□□□□□ -1.88
SPTA1-206ENST00000484520 DAZ1Q9NQZ3 744 aaKnown RBP3.29□□□□□ -1.88
SPTA1-206ENST00000484520 OTORQ9NRC9 128 aa3.29□□□□□ -1.88
SPTA1-206ENST00000484520 DOK5Q9P104 306 aa3.29□□□□□ -1.88
SPTA1-206ENST00000484520 PEF1Q9UBV8 284 aaKnown RBP3.29□□□□□ -1.88
SPTA1-206ENST00000484520 PUS1Q9Y606 427 aaKnown RBP eCLIP3.29□□□□□ -1.88
SPTA1-206ENST00000484520 LY96Q9Y6Y9 160 aa3.29□□□□□ -1.88
SPTA1-206ENST00000484520 AKAP6Q13023 2319 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 ARID1AO14497 2285 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 A0A087X0K7 114 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 CXorf65A6NEN9 183 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 GAGE12JA6NER3 117 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 ZNF98A6NK75 572 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 FAM74A7A6NL05 159 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 C9JCJ5 164 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 M0QZ24 198 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 LGALS9O00182 355 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 PPP1R2P9O14990 202 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 PAGE4O60829 102 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 LY6G6DO95868 133 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 NBEAP1P0C6P0 100 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 GP9P14770 177 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 CRYBB3P26998 211 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 CSN1S1P47710 185 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 CDX1P47902 265 aaPredicted RBP3.28□□□□□ -1.88
SPTA1-206ENST00000484520 FGF8P55075 233 aaPredicted RBP3.28□□□□□ -1.88
SPTA1-206ENST00000484520 RPL19P84098 196 aaKnown RBP3.28□□□□□ -1.88
SPTA1-206ENST00000484520 GCSAMLQ5JQS6 135 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 CST9LP1Q5W188 147 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 TOMM20LQ6UXN7 152 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 CLEC19AQ6UXS0 136 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 OR8I2Q8N0Y5 310 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 C5orf17Q8NAS9 161 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 CMTM2Q8TAZ6 248 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 C4orf3Q8WVX3 66 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 PCNPQ8WW12 178 aaKnown RBP3.28□□□□□ -1.88
SPTA1-206ENST00000484520 FXYD5Q96DB9 178 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 FAM167A-AS1Q96KT0 104 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 SLC50A1Q9BRV3 221 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 SLC25A2Q9BXI2 301 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 CTDSP1Q9GZU7 261 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 TMEM242Q9NWH2 141 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 PPP1R14DQ9NXH3 145 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 MRPL36Q9P0J6 103 aaKnown RBP3.28□□□□□ -1.88
SPTA1-206ENST00000484520 PEMTQ9UBM1 199 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 NAT8Q9UHE5 227 aa3.28□□□□□ -1.88
SPTA1-206ENST00000484520 YLPM1P49750 1951 aaKnown RBP3.28□□□□□ -1.88
SPTA1-206ENST00000484520 SPG11Q96JI7 2443 aa3.28□□□□□ -1.89
SPTA1-206ENST00000484520 TRBV19A0A075B6N1 114 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 A0A087WWC5 75 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 IGHV3-21A0A0B4J1V1 117 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 TRBV6-1A0A0K0K1D8 114 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 A0A1B0GV50 99 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 ZNF727A8MUV8 499 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 A8MWP6 167 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 TSPAN4O14817 238 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 BUB3O43684 328 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 CRLF1O75462 422 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 IGHV3-48P01763 117 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 APOC3P02656 99 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 MT-ND4LP03901 98 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 SRP19P09132 144 aaKnown RBP3.27□□□□□ -1.89
SPTA1-206ENST00000484520 IGLC2P0DOY2 106 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 GATA2P23769 480 aaPredicted RBP3.27□□□□□ -1.89
SPTA1-206ENST00000484520 CNN1P51911 297 aaKnown RBP3.27□□□□□ -1.89
SPTA1-206ENST00000484520 TAS2R60P59551 318 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 CD81P60033 236 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 CCL20P78556 96 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 DEFA5Q01523 94 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 USF2Q15853 346 aaPredicted RBP3.27□□□□□ -1.89
SPTA1-206ENST00000484520 TMEM241Q24JQ0 296 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 RPEL1Q2QD12 228 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 PATE2Q6UY27 113 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 C19orf35Q6ZS72 473 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 Q71RC1 249 aaPredicted RBP3.27□□□□□ -1.89
SPTA1-206ENST00000484520 SSX7Q7RTT5 188 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 KLHDC1Q8N7A1 406 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 CYB561D1Q8N8Q1 229 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 TVP23CQ96ET8 276 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 FMC1Q96HJ9 113 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 NOL4LQ96MY1 436 aaPredicted RBP3.27□□□□□ -1.89
SPTA1-206ENST00000484520 MS4A10Q96PG2 267 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 SMR3AQ99954 134 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 RARRES2Q99969 163 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 SMIM7Q9BQ49 75 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 ATG101Q9BSB4 218 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 CHRDL1Q9BU40 450 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 SCRT1Q9BWW7 348 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 TSSC4Q9Y5U2 329 aaPredicted RBP3.27□□□□□ -1.89
SPTA1-206ENST00000484520 DOCK11Q5JSL3 2073 aa3.27□□□□□ -1.89
SPTA1-206ENST00000484520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.27□□□□□ -1.899e-7■□□□□ 8.5
SPTA1-206ENST00000484520 CELSR1Q9NYQ6 3014 aa3.26□□□□□ -1.89
SPTA1-206ENST00000484520 TRAV2A0A0B4J234 112 aa3.26□□□□□ -1.89
SPTA1-206ENST00000484520 CLPSL1A2RUU4 121 aa3.26□□□□□ -1.89
SPTA1-206ENST00000484520 SH2D7A6NKC9 451 aaPredicted RBP3.26□□□□□ -1.89
SPTA1-206ENST00000484520 H3BQ15 152 aa3.26□□□□□ -1.89
SPTA1-206ENST00000484520 M0R036 132 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms