RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 S100A7AQ86SG5 101 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 SLC50A1Q9BRV3 221 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 ZNF586Q9NXT0 402 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 H7BYZ3 331 aa12.54□□□□□ -0.4
ATG4B-221ENST00000483778 HOXA5P20719 270 aa12.54□□□□□ -0.4
ATG4B-221ENST00000483778 SOHLH1Q5JUK2 328 aa12.54□□□□□ -0.4
ATG4B-221ENST00000483778 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
ATG4B-221ENST00000483778 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
ATG4B-221ENST00000483778 TMEM263Q8WUH6 116 aaKnown RBP12.54□□□□□ -0.4
ATG4B-221ENST00000483778 WDR83OSQ9Y284 106 aa12.54□□□□□ -0.4
ATG4B-221ENST00000483778 TRAV12-3A0A0B4J271 114 aa12.53□□□□□ -0.4
ATG4B-221ENST00000483778 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
ATG4B-221ENST00000483778 C5orf51A6NDU8 294 aa12.53□□□□□ -0.4
ATG4B-221ENST00000483778 CAV2P51636 162 aa12.53□□□□□ -0.4
ATG4B-221ENST00000483778 IL15RAQ13261 267 aa12.53□□□□□ -0.4
ATG4B-221ENST00000483778 ZNF846Q147U1 533 aa12.53□□□□□ -0.4
ATG4B-221ENST00000483778 OR10J6PQ8NGY7 276 aa12.53□□□□□ -0.4
ATG4B-221ENST00000483778 ZNF431Q8TF32 576 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-221ENST00000483778 RYR1P21817 5038 aa12.53□□□□□ -0.4
ATG4B-221ENST00000483778 A0A0J9YY99 117 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 GAGE12BA1L429 117 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 GAGE7O76087 117 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 ERCC8Q13216 396 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 OR5I1Q13606 314 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 VWC2Q2TAL6 325 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 CNPY1Q3B7I2 92 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 SSX7Q7RTT5 188 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 C12orf45Q8N5I9 185 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-221ENST00000483778 C2orf50Q96LR7 162 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 NUDT15Q9NV35 164 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 PXMP4Q9Y6I8 212 aa12.52□□□□□ -0.41
ATG4B-221ENST00000483778 TRAV26-1A0A087WT03 109 aa12.51□□□□□ -0.41
ATG4B-221ENST00000483778 NPIPB6E9PJ23 425 aa12.51□□□□□ -0.41
ATG4B-221ENST00000483778 M0R3E3 92 aa12.51□□□□□ -0.41
ATG4B-221ENST00000483778 CCL18P55774 89 aa12.51□□□□□ -0.41
ATG4B-221ENST00000483778 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
ATG4B-221ENST00000483778 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
ATG4B-221ENST00000483778 UQCC1Q9NVA1 299 aa12.51□□□□□ -0.41
ATG4B-221ENST00000483778 RNF24Q9Y225 148 aa12.51□□□□□ -0.41
ATG4B-221ENST00000483778 NDUFB4O95168 129 aa12.5□□□□□ -0.41
ATG4B-221ENST00000483778 RAB32Q13637 225 aa12.5□□□□□ -0.41
ATG4B-221ENST00000483778 Q6ZRG5 221 aa12.5□□□□□ -0.41
ATG4B-221ENST00000483778 TMEM252Q8N6L7 170 aa12.5□□□□□ -0.41
ATG4B-221ENST00000483778 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
ATG4B-221ENST00000483778 SLC39A9Q9NUM3 307 aa12.5□□□□□ -0.41
ATG4B-221ENST00000483778 UBE2L5PA0A1B0GUS4 154 aa12.49□□□□□ -0.41
ATG4B-221ENST00000483778 H2AFB2P0C5Z0 115 aa12.49□□□□□ -0.41
ATG4B-221ENST00000483778 RPL29P47914 159 aaKnown RBP12.49□□□□□ -0.41
ATG4B-221ENST00000483778 RAB31Q13636 194 aa12.49□□□□□ -0.41
ATG4B-221ENST00000483778 CLINT1Q14677 625 aa12.49□□□□□ -0.41
ATG4B-221ENST00000483778 ESRGQ1W209 222 aa12.49□□□□□ -0.41
ATG4B-221ENST00000483778 GCSAMLQ5JQS6 135 aa12.49□□□□□ -0.41
ATG4B-221ENST00000483778 Q6ZQT7 251 aa12.49□□□□□ -0.41
ATG4B-221ENST00000483778 Q6ZTI0 123 aa12.49□□□□□ -0.41
ATG4B-221ENST00000483778 GNPNAT1Q96EK6 184 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-221ENST00000483778 TRBV19A0A075B6N1 114 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 PYYP10082 97 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 S100A10P60903 97 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 CD300CQ08708 224 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 OR1L4Q8NGR5 311 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 RXFP4Q8TDU9 374 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 Q9H8V8 135 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 LYRM2Q9NU23 88 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-221ENST00000483778 HSPG2P98160 4391 aa12.48□□□□□ -0.41
ATG4B-221ENST00000483778 LEPP41159 167 aa12.47□□□□□ -0.41
ATG4B-221ENST00000483778 SULT1A1P50225 295 aa12.47□□□□□ -0.41
ATG4B-221ENST00000483778 BAXQ07812 192 aa12.47□□□□□ -0.41
ATG4B-221ENST00000483778 GUK1Q16774 197 aa12.47□□□□□ -0.41
ATG4B-221ENST00000483778 EXOC3-AS1Q8N2X6 119 aa12.47□□□□□ -0.41
ATG4B-221ENST00000483778 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
ATG4B-221ENST00000483778 GSN-AS1Q9NRJ2 163 aa12.47□□□□□ -0.41
ATG4B-221ENST00000483778 C16orf90A8MZG2 172 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 ZNF324O75467 553 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-221ENST00000483778 RLN2P04090 185 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 M6PRP20645 277 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 FGF7P21781 194 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 S100A11P31949 105 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 NHLH2Q02577 135 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 CHAC2Q8WUX2 184 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 FAM19A4Q96LR4 140 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 ODF3Q96PU9 254 aa12.46□□□□□ -0.41
ATG4B-221ENST00000483778 ABCA13Q86UQ4 5058 aa12.46□□□□□ -0.42
ATG4B-221ENST00000483778 SNURFLB1AK76 121 aa12.45□□□□□ -0.42
ATG4B-221ENST00000483778 SIX6O95475 246 aa12.45□□□□□ -0.42
ATG4B-221ENST00000483778 BTN1A1Q13410 526 aa12.45□□□□□ -0.42
ATG4B-221ENST00000483778 BLNKQ8WV28 456 aa12.45□□□□□ -0.42
ATG4B-221ENST00000483778 VSIG2Q96IQ7 327 aa12.45□□□□□ -0.42
ATG4B-221ENST00000483778 PFDN5Q99471 154 aa12.45□□□□□ -0.42
ATG4B-221ENST00000483778 C7orf71A4D174 169 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 ZNF253O75346 499 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 HIST1H1EP10412 219 aaKnown RBP12.44□□□□□ -0.42
ATG4B-221ENST00000483778 PVALBP20472 110 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-221ENST00000483778 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
ATG4B-221ENST00000483778 DAZ2Q13117 558 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms