RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CDX1P47902 265 aaPredicted RBP10.7□□□□□ -0.7
CLK3-204ENST00000483723 FAM3BP58499 235 aaPredicted RBP10.7□□□□□ -0.7
CLK3-204ENST00000483723 NUDT10Q8NFP7 164 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
CLK3-204ENST00000483723 NUDT11Q96G61 164 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 GRAMD2BQ96HH9 432 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 BTF3L4Q96K17 158 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 SRD5A3Q9H8P0 318 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 DAZ1Q9NQZ3 744 aaKnown RBP10.7□□□□□ -0.7
CLK3-204ENST00000483723 CLEC5AQ9NY25 188 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 C19orf71A6NCJ1 209 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 LGALS9O00182 355 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 CHEK1O14757 476 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 HLA-DMBP28068 263 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 TM4SF20Q53R12 229 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 LCN12Q6JVE5 192 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 REC114Q7Z4M0 266 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 OTOGQ6ZRI0 2925 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 A0A1W2PPQ1 181 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 SRD5A1P18405 259 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 RAB5BP61020 215 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 TCTEX1D4Q5JR98 221 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 C8orf86Q6ZUL3 223 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 PRNTQ86SH4 94 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 WFDC12Q8WWY7 111 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 C16orf95Q9H693 158 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
CLK3-204ENST00000483723 SMIM27A0A1W2PRY6 76 aa10.68□□□□□ -0.7
CLK3-204ENST00000483723 PHOX2AO14813 284 aa10.68□□□□□ -0.7
CLK3-204ENST00000483723 HILS1P60008 231 aa10.68□□□□□ -0.7
CLK3-204ENST00000483723 RPEL1Q2QD12 228 aa10.68□□□□□ -0.7
CLK3-204ENST00000483723 IGFL4Q6B9Z1 124 aa10.68□□□□□ -0.7
CLK3-204ENST00000483723 LINC00322Q6ZN03 302 aaPredicted RBP10.68□□□□□ -0.7
CLK3-204ENST00000483723 ZNF418Q8TF45 676 aaPredicted RBP10.68□□□□□ -0.7
CLK3-204ENST00000483723 AKAP9Q99996 3911 aa10.68□□□□□ -0.7
CLK3-204ENST00000483723 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
CLK3-204ENST00000483723 A0A087WW49 117 aa10.67□□□□□ -0.7
CLK3-204ENST00000483723 RBAKDNA6NC62 111 aa10.67□□□□□ -0.7
CLK3-204ENST00000483723 A8MWP6 167 aa10.67□□□□□ -0.7
CLK3-204ENST00000483723 SOCS3O14543 225 aa10.67□□□□□ -0.7
CLK3-204ENST00000483723 GATCO43716 136 aaKnown RBP10.67□□□□□ -0.7
CLK3-204ENST00000483723 FOSL1P15407 271 aa10.67□□□□□ -0.7
CLK3-204ENST00000483723 TMEM213A2RRL7 107 aa10.67□□□□□ -0.7
CLK3-204ENST00000483723 ZNF705GA8MUZ8 300 aaPredicted RBP10.67□□□□□ -0.7
CLK3-204ENST00000483723 ZNF705FA8MVS1 300 aaPredicted RBP10.67□□□□□ -0.7
CLK3-204ENST00000483723 NPIPB6E9PJ23 425 aa10.67□□□□□ -0.7
CLK3-204ENST00000483723 IGKV2-40A0A087WW87 121 aaPredicted RBP10.66□□□□□ -0.7
CLK3-204ENST00000483723 IGKV2D-40P01614 121 aaPredicted RBP10.66□□□□□ -0.7
CLK3-204ENST00000483723 TRGC2P03986 189 aa10.66□□□□□ -0.7
CLK3-204ENST00000483723 KLF5Q13887 457 aaPredicted RBP10.66□□□□□ -0.7
CLK3-204ENST00000483723 CT83Q5H943 113 aa10.66□□□□□ -0.7
CLK3-204ENST00000483723 Q71RC1 249 aaPredicted RBP10.66□□□□□ -0.7
CLK3-204ENST00000483723 ZFP82Q8N141 532 aa10.66□□□□□ -0.7
CLK3-204ENST00000483723 ANK3Q12955 4377 aaKnown RBP10.66□□□□□ -0.7
CLK3-204ENST00000483723 TLN2Q9Y4G6 2542 aa10.66□□□□□ -0.7
CLK3-204ENST00000483723 PRAC2D3DTV9 90 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 PRR27Q6MZM9 219 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 RNF182Q8N6D2 247 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 C4orf3Q8WVX3 66 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 ZC2HC1AQ96GY0 325 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 PRR25Q96S07 402 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 VGLL1Q99990 258 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 ACANP16112 2415 aa10.65□□□□□ -0.7
CLK3-204ENST00000483723 EDN2P20800 178 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 HOXD3P31249 432 aaPredicted RBP10.64□□□□□ -0.71
CLK3-204ENST00000483723 BMI1P35226 326 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 CRIP1P50238 77 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 NRN1Q9NPD7 142 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 PPP1R14DQ9NXH3 145 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 SONP18583 2426 aaKnown RBP10.64□□□□□ -0.71
CLK3-204ENST00000483723 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
CLK3-204ENST00000483723 GBGT1Q8N5D6 347 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 OR4B1Q8NGF8 309 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 LINC01006Q8NI28 216 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 TSKUQ8WUA8 353 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 C16orf92Q96LL3 132 aa10.64□□□□□ -0.71
CLK3-204ENST00000483723 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
CLK3-204ENST00000483723 IZUMO1RA6ND01 250 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 NDUFA7O95182 113 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 P01737 135 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 SYNJ2BPP57105 145 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 TCF24Q7RTU0 167 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 DAZAP1Q96EP5 407 aaKnown RBP10.63□□□□□ -0.71
CLK3-204ENST00000483723 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 C8orf49Q96NF6 230 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 JMJD8Q96S16 334 aa10.63□□□□□ -0.71
CLK3-204ENST00000483723 A8MWL6 223 aa10.62□□□□□ -0.71
CLK3-204ENST00000483723 LINC01619G3V211 115 aa10.62□□□□□ -0.71
CLK3-204ENST00000483723 CA1P00915 261 aaPredicted RBP10.62□□□□□ -0.71
CLK3-204ENST00000483723 FRZBQ92765 325 aa10.62□□□□□ -0.71
CLK3-204ENST00000483723 ASCL2Q99929 193 aa10.62□□□□□ -0.71
CLK3-204ENST00000483723 AGPAT4-IT1Q9H0P7 198 aa10.62□□□□□ -0.71
CLK3-204ENST00000483723 FAM231BA6NCW3 169 aa10.61□□□□□ -0.71
CLK3-204ENST00000483723 CBLN1P23435 193 aa10.61□□□□□ -0.71
CLK3-204ENST00000483723 ERCC8Q13216 396 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms