RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 SLC25A48Q6ZT89 311 aaKnown RBP6.2□□□□□ -1.42
COL4A5-205ENST00000483338 Q71RC1 249 aaPredicted RBP6.2□□□□□ -1.42
COL4A5-205ENST00000483338 TRPT1Q86TN4 253 aaKnown RBP6.2□□□□□ -1.42
COL4A5-205ENST00000483338 PDPNQ86YL7 162 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 C11orf53Q8IXP5 236 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 FER1L5A0AVI2 2057 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 TRAV2A0A0B4J234 112 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 IGLV3-19P01714 112 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 MYCNOSP40205 109 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 HSPE1P61604 102 aaKnown RBP6.2□□□□□ -1.42
COL4A5-205ENST00000483338 HRCT1Q6UXD1 115 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 ZNF441Q8N8Z8 693 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 OR11H6Q8NGC7 330 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 TNCP24821 2201 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 TRAV40A0A0B4J280 105 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 SCRG1O75711 98 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 DPM2O94777 84 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 PRSS1P07477 247 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 ZNF32P17041 273 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 LINC00596Q86U02 117 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 ZNRF2Q8NHG8 242 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 TRAV8-4A0A0B4J246 113 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 LINC01619G3V211 115 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 NXPH1P58417 271 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 TMEM155Q4W5P6 130 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 OR4C13Q8NGP0 309 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 NTN5Q8WTR8 489 aaPredicted RBP6.19□□□□□ -1.42
COL4A5-205ENST00000483338 TMEM160Q9NX00 188 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 U3KQK5 164 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 IGKV3D-11A0A0A0MRZ8 115 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 CEMP1Q6PRD7 247 aaPredicted RBP6.19□□□□□ -1.42
COL4A5-205ENST00000483338 FOXC2Q99958 501 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 PAXXQ9BUH6 204 aa6.19□□□□□ -1.42
COL4A5-205ENST00000483338 A0A096LPE4 126 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 A0A1W2PPZ6 126 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 EFNA4P52798 201 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 RIGQ13278 110 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 LYRM7Q5U5X0 104 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 DUX3Q96PT4 197 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 AAMDCQ9H7C9 122 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 FAM236AA0A1B0GUQ0 79 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 FAM236BA0A1B0GV22 79 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 J3QLI3 93 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 TIMM23O14925 209 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 MZT1Q08AG7 82 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 DUX4L9Q6RFH8 374 aaPredicted RBP6.18□□□□□ -1.42
COL4A5-205ENST00000483338 FXYD5Q96DB9 178 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 LINC00526Q96FQ7 95 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 FRYQ5TBA9 3013 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 LRP4O75096 1905 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 A0A1W2PR77 199 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 K7EM74 188 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 ZFAND5O76080 213 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 AMN1Q8IY45 258 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 OTOGLQ3ZCN5 2332 aa6.18□□□□□ -1.42
COL4A5-205ENST00000483338 ABCA1O95477 2261 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 REV3LO60673 3130 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 TRGV8A0A0C4DH27 118 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 FCGR3BO75015 233 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 OXTP01178 125 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 TWIST1Q15672 202 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 MLANAQ16655 118 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 TEX36Q5VZQ5 186 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 ORMDL3Q8N138 153 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 UCN2Q96RP3 112 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 TNRC6BQ9UPQ9 1833 aaKnown RBP6.17□□□□□ -1.42
COL4A5-205ENST00000483338 TRBV7-7A0A0K0K1E9 115 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 LMO7DNF2Z398 122 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 SMKR1H3BMG3 65 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 UQCRQO14949 82 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 Q5XG85 94 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 TIMD4Q96H15 378 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 LINC00477Q96M19 166 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 IFI27L2Q9H2X8 130 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 MRPL35Q9NZE8 188 aaKnown RBP6.17□□□□□ -1.42
COL4A5-205ENST00000483338 AKAP6Q13023 2319 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 DSCAML1Q8TD84 2053 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 CFAP54Q96N23 3096 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 TRGV11A0A075B6L2 103 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 IGHV3OR15-7A0A075B7D8 119 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 PGPA6NDG6 321 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 ZNF785A8K8V0 405 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 EDN2P20800 178 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 SRSF12Q8WXF0 261 aaKnown RBP6.17□□□□□ -1.42
COL4A5-205ENST00000483338 ASCL2Q99929 193 aa6.17□□□□□ -1.42
COL4A5-205ENST00000483338 DOCK10Q96BY6 2186 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 PIEZO1Q92508 2521 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 C12orf77C9JDV5 145 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 LGALS1P09382 135 aaKnown RBP6.16□□□□□ -1.42
COL4A5-205ENST00000483338 FOXF2Q12947 444 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 UTF1Q5T230 341 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 PCNX2A6NKB5 2137 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 NCBP2LA6PVI3 153 aaKnown RBP6.16□□□□□ -1.42
COL4A5-205ENST00000483338 CDX4O14627 284 aaPredicted RBP6.16□□□□□ -1.42
COL4A5-205ENST00000483338 LEPP41159 167 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 ZNF56Q15929 161 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 FAM104BQ5XKR9 115 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 NDUFA11Q86Y39 141 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms