RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 H1FXQ92522 213 aaKnown RBP3.81□□□□□ -1.8
USP40-213ENST00000483216 SRXN1Q9BYN0 137 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 LINC00470Q9BZP3 86 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 MTCH1Q9NZJ7 389 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 SPCS1Q9Y6A9 102 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 V9GYV3 84 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 IGHV1-24A0A0C4DH33 117 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 SPTY2D1-AS1A0A0U1RR47 76 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 A0A1W2PPM0 123 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 CLPSP04118 112 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 ARL14EPLP0DKL9 152 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 CRYGSP22914 178 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 PTGDSP41222 190 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 AESQ08117 197 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 POU2AF1Q16633 256 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 LTC4SQ16873 150 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 C5orf64Q2M2E5 130 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 LGALS9BQ3B8N2 356 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 PIGYQ3MUY2 71 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 LINC01620Q4KN68 170 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 CENPWQ5EE01 88 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 LGALS9CQ6DKI2 356 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 FOXI2Q6ZQN5 318 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 PRSS41Q7RTY9 318 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 TTC9CQ8N5M4 171 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.8□□□□□ -1.8
USP40-213ENST00000483216 ZNF418Q8TF45 676 aaPredicted RBP3.8□□□□□ -1.8
USP40-213ENST00000483216 PATE1Q8WXA2 126 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 PIGCQ92535 297 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 FAM104AQ969W3 186 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 FMC1Q96HJ9 113 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 TMEM101Q96IK0 257 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 HDHD3Q9BSH5 251 aaPredicted RBP3.8□□□□□ -1.8
USP40-213ENST00000483216 VSIRQ9H7M9 311 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 HES4Q9HCC6 221 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 NGBQ9NPG2 151 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 CLCF1Q9UBD9 225 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 PRNDQ9UKY0 176 aa3.8□□□□□ -1.8
USP40-213ENST00000483216 TMEM131Q92545 1883 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 MUC21A0A0G2JKD1 596 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 A0A0J9YXY3 114 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 MUC21A0A140T8X8 626 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 SERTM2A0A1B0GWG4 89 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 C2orf70A6NJV1 201 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 J3QT63 122 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 SCTP09683 121 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 C8orf88P0DMB2 117 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 MGST1P10620 155 aaKnown RBP3.79□□□□□ -1.8
USP40-213ENST00000483216 RAB9AP51151 201 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 PPP1CAP62136 330 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 SMAGPQ0VAQ4 97 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 DAZ2Q13117 558 aaKnown RBP3.79□□□□□ -1.8
USP40-213ENST00000483216 C1orf61Q13536 156 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 LAGE3Q14657 143 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 PLGLAQ15195 96 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 CLEC12BQ2HXU8 276 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 DEFB110Q30KQ9 67 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 TDRG1Q3Y452 100 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 LINC01545Q5VT33 79 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 Q6P435 159 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 Q6ZS52 159 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 SHISA6Q6ZSJ9 500 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 SLC25A48Q6ZT89 311 aaKnown RBP3.79□□□□□ -1.8
USP40-213ENST00000483216 TCF23Q7RTU1 214 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 RPRMLQ8N4K4 120 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 ZADH2Q8N4Q0 377 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 Q8N976 141 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 NAT6Q93015 286 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 EMC6Q9BV81 110 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 GGTLC1Q9BX51 225 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 DAZ3Q9NR90 486 aaKnown RBP3.79□□□□□ -1.8
USP40-213ENST00000483216 ZNF492Q9P255 531 aa3.79□□□□□ -1.8
USP40-213ENST00000483216 AMMECR1Q9Y4X0 333 aaPredicted RBP3.79□□□□□ -1.8
USP40-213ENST00000483216 TRBV20-1A0A075B6N2 111 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 IGHV1OR15-9A0A0B4J2B8 117 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 OR2T8A6NH00 312 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 GNG7O60262 68 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 NUPR1O60356 82 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 SCGB2A1O75556 95 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 IGKV1-5P01602 117 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 P01737 135 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 ZNF32P17041 273 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 SSTR5P35346 364 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 ASIPP42127 132 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 LGALS7P47929 136 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 ATP5G3P48201 142 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 EDDM3BP56851 147 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 SLC35B1P78383 322 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 PSG5Q15238 335 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 TNXAQ16473 311 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 CEACAM16Q2WEN9 425 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.78□□□□□ -1.8
USP40-213ENST00000483216 PRAMEF5Q5TYX0 476 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 PRAMEF6Q5VXH4 476 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 CARD17Q5XLA6 110 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 WDR82Q6UXN9 313 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 AAED1Q7RTV5 226 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 OR1L1Q8NH94 360 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 ARPC1AQ92747 370 aa3.78□□□□□ -1.8
USP40-213ENST00000483216 GPR82Q96P67 336 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms