RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 HIST1H2BNQ99877 126 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 HIST1H2BMQ99879 126 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 TMEM14CQ9P0S9 112 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 GNG13Q9P2W3 67 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 VAX2Q9UIW0 290 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 ZNF727A8MUV8 499 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 H3BTX0 84 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 HIST3H2BBQ8N257 126 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 BLNKQ8WV28 456 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 FXYD5Q96DB9 178 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 SMAD5-AS1Q9Y6J3 95 aa11.41□□□□□ -0.58
PHGDH-205ENST00000482968 MRPS12O15235 138 aaKnown RBP11.4□□□□□ -0.58
PHGDH-205ENST00000482968 CSN3P07498 182 aa11.4□□□□□ -0.58
PHGDH-205ENST00000482968 NBEAP1P0C6P0 100 aa11.4□□□□□ -0.58
PHGDH-205ENST00000482968 PSMB3P49720 205 aa11.4□□□□□ -0.58
PHGDH-205ENST00000482968 RPL11P62913 178 aaKnown RBP11.4□□□□□ -0.58
PHGDH-205ENST00000482968 ADAMTSL5Q6ZMM2 481 aa11.4□□□□□ -0.58
PHGDH-205ENST00000482968 GLMPQ8WWB7 406 aa11.4□□□□□ -0.58
PHGDH-205ENST00000482968 C17orf77Q96MU5 243 aa11.4□□□□□ -0.58
PHGDH-205ENST00000482968 TMEM167BQ9NRX6 74 aa11.4□□□□□ -0.58
PHGDH-205ENST00000482968 ZNF586Q9NXT0 402 aa11.4□□□□□ -0.58
PHGDH-205ENST00000482968 ZNF785A8K8V0 405 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 CXCL1P09341 107 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 HIST1H1EP10412 219 aaKnown RBP11.39□□□□□ -0.59
PHGDH-205ENST00000482968 GALR1P47211 349 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 UBE2G2P60604 165 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 SHISA2Q6UWI4 295 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 SIGLEC15Q6ZMC9 328 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 GPR82Q96P67 336 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 IGKV3-7A0A075B6H7 116 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 M0QZ24 198 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 TRGC2P03986 189 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 BMI1P35226 326 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 NAT8Q9UHE5 227 aa11.39□□□□□ -0.59
PHGDH-205ENST00000482968 TGIF2-C20orf24A0A0A6YYL0 155 aa11.38□□□□□ -0.59
PHGDH-205ENST00000482968 PAGE4O60829 102 aa11.38□□□□□ -0.59
PHGDH-205ENST00000482968 TCF24Q7RTU0 167 aa11.38□□□□□ -0.59
PHGDH-205ENST00000482968 LINC00482Q8N8I6 264 aa11.38□□□□□ -0.59
PHGDH-205ENST00000482968 MDFIQ99750 246 aa11.38□□□□□ -0.59
PHGDH-205ENST00000482968 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
PHGDH-205ENST00000482968 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
PHGDH-205ENST00000482968 RAB4BP61018 213 aa11.37□□□□□ -0.59
PHGDH-205ENST00000482968 RANP62826 216 aaKnown RBP11.37□□□□□ -0.59
PHGDH-205ENST00000482968 CST9LP1Q5W188 147 aa11.37□□□□□ -0.59
PHGDH-205ENST00000482968 SRD5A3Q9H8P0 318 aa11.37□□□□□ -0.59
PHGDH-205ENST00000482968 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
PHGDH-205ENST00000482968 TRBV19A0A075B6N1 114 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 FAM90A2PQ658T7 463 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 TMEM183AQ8IXX5 376 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 PACRGQ96M98 296 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-205ENST00000482968 YTHDF2Q9Y5A9 579 aaKnown RBP11.36□□□□□ -0.59
PHGDH-205ENST00000482968 HELTA6NFD8 242 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 IFITM10A6NMD0 228 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 TMEM250H0YL14 139 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 TMEM241Q24JQ0 296 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 GBGT1Q8N5D6 347 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 DYNLRB2Q8TF09 96 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 ANAPC16Q96DE5 110 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 MANBALQ9NQG1 85 aa11.36□□□□□ -0.59
PHGDH-205ENST00000482968 SLC17A3O00476 420 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 SAP30O75446 220 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 NDUFB4O95168 129 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 GCGP01275 180 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 FABP4P15090 132 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 DDTP30046 118 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 GPR61Q9BZJ8 451 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 STAB1Q9NY15 2570 aa11.35□□□□□ -0.59
PHGDH-205ENST00000482968 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
PHGDH-205ENST00000482968 DEFB114Q30KQ6 69 aa11.34□□□□□ -0.59
PHGDH-205ENST00000482968 IGFL4Q6B9Z1 124 aa11.34□□□□□ -0.59
PHGDH-205ENST00000482968 FRZBQ92765 325 aa11.34□□□□□ -0.59
PHGDH-205ENST00000482968 A0A087X0K7 114 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 A0A1W2PRE2 83 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 PGPA6NDG6 321 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 ATP5G3P48201 142 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 FAM3BP58499 235 aaPredicted RBP11.33□□□□□ -0.59
PHGDH-205ENST00000482968 JOSD1Q15040 202 aaPredicted RBP11.33□□□□□ -0.59
PHGDH-205ENST00000482968 WFDC3Q8IUB2 231 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 EXOC3-AS1Q8N2X6 119 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 Q9H3A6 140 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 NRN1Q9NPD7 142 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 SIGLEC8Q9NYZ4 499 aa11.33□□□□□ -0.59
PHGDH-205ENST00000482968 C11orf94C9JXX5 98 aa11.33□□□□□ -0.6
PHGDH-205ENST00000482968 TFPI2P48307 235 aa11.33□□□□□ -0.6
PHGDH-205ENST00000482968 PDE6HQ13956 83 aa11.33□□□□□ -0.6
PHGDH-205ENST00000482968 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-205ENST00000482968 COA6Q5JTJ3 125 aaKnown RBP11.33□□□□□ -0.6
PHGDH-205ENST00000482968 KCNIP4Q6PIL6 250 aa11.33□□□□□ -0.6
PHGDH-205ENST00000482968 RBPMS2Q6ZRY4 209 aaKnown RBP11.33□□□□□ -0.6
PHGDH-205ENST00000482968 SMIM7Q9BQ49 75 aa11.33□□□□□ -0.6
PHGDH-205ENST00000482968 MS4A6AQ9H2W1 248 aa11.33□□□□□ -0.6
PHGDH-205ENST00000482968 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
PHGDH-205ENST00000482968 H7BYZ3 331 aa11.32□□□□□ -0.6
PHGDH-205ENST00000482968 CD33P20138 364 aa11.32□□□□□ -0.6
PHGDH-205ENST00000482968 MEF2BQ02080 365 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-205ENST00000482968 TMEM61Q8N0U2 210 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms