RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 PPP1R14DQ9NXH3 145 aa6.38□□□□□ -1.39
SNX4-205ENST00000482965 PRELID1Q9Y255 219 aa6.38□□□□□ -1.39
SNX4-205ENST00000482965 IGHV3OR16-12A0A075B7B8 117 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 ZNF705EA8MWA4 302 aaPredicted RBP6.37□□□□□ -1.39
SNX4-205ENST00000482965 PRAC2D3DTV9 90 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 TAAR5O14804 337 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 EIF3GO75821 320 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNX4-205ENST00000482965 NDUFB4O95168 129 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 MBP02144 154 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 AMBPP02760 352 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 MIFP14174 115 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 UBE2L3P68036 154 aaKnown RBP6.37□□□□□ -1.39
SNX4-205ENST00000482965 SERF2P84101 59 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 SPINK13Q1W4C9 94 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 AMTNQ6UX39 209 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 Q6ZNX1 250 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 OR10G4Q8NGN3 311 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 OR10G9Q8NGN4 311 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 OR10G7Q8NGN6 311 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 OR10J6PQ8NGY7 276 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 FXYD5Q96DB9 178 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 GNPNAT1Q96EK6 184 aaPredicted RBP6.37□□□□□ -1.39
SNX4-205ENST00000482965 MRPL53Q96EL3 112 aaKnown RBP6.37□□□□□ -1.39
SNX4-205ENST00000482965 SH3BGRL3Q9H299 93 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 C11orf68Q9H3H3 251 aaKnown RBP6.37□□□□□ -1.39
SNX4-205ENST00000482965 AAMDCQ9H7C9 122 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 GOLT1BQ9Y3E0 138 aa6.37□□□□□ -1.39
SNX4-205ENST00000482965 IGHV4-28A0A0C4DH34 117 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 BOLA2-SMG1P6H3BVE0 249 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 M0R2Z0 102 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 M0R3E3 92 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 DEFB4AO15263 64 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 JTBO76095 146 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 INSP01308 110 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 CDC34P49427 236 aaPredicted RBP6.36□□□□□ -1.39
SNX4-205ENST00000482965 ICAM4Q14773 271 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 CASC10Q5T4H9 136 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 PQLC2Q6ZP29 291 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 EXOC3-AS1Q8N2X6 119 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 Q8NAQ8 132 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 OR11H4Q8NGC9 324 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 ZNF503Q96F45 646 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 PHYHIPLQ96FC7 376 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 IGF2BP2-AS1Q96M15 143 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 X6R8D5 127 aa6.36□□□□□ -1.39
SNX4-205ENST00000482965 hCG_2014768A0A024R1R8 64 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 A0A0D9SG52 128 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 HMSDA8MTL9 139 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 HMGB3O15347 200 aaKnown RBP6.35□□□□□ -1.39
SNX4-205ENST00000482965 PMS2P11Q13670 270 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 ZNF345Q14585 488 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 ZNF705AQ6ZN79 300 aaPredicted RBP6.35□□□□□ -1.39
SNX4-205ENST00000482965 BAP18Q8IXM2 172 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 KCNRGQ8N5I3 272 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 ARPC5LQ9BPX5 153 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 TMEM208Q9BTX3 173 aa6.35□□□□□ -1.39
SNX4-205ENST00000482965 ACTR3CQ9C0K3 210 aaPredicted RBP6.35□□□□□ -1.39
SNX4-205ENST00000482965 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 TRAV12-2A0A075B6T6 113 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 KANTRA0A1W2PQU2 76 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 CXorf65A6NEN9 183 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 SMIM9A6NGZ8 99 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 NPIPB6E9PJ23 425 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 CRXO43186 299 aaPredicted RBP6.34□□□□□ -1.39
SNX4-205ENST00000482965 HBE1P02100 147 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 RBMY1A1P0DJD3 496 aaKnown RBP6.34□□□□□ -1.39
SNX4-205ENST00000482965 RBMY1CP0DJD4 496 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 ARL14EPLP0DKL9 152 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 TSPOP30536 169 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 CDKN1BP46527 198 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 CSN1S1P47710 185 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 RANP62826 216 aaKnown RBP6.34□□□□□ -1.39
SNX4-205ENST00000482965 RBMY1FQ15415 496 aaKnown RBP6.34□□□□□ -1.39
SNX4-205ENST00000482965 AKR1C8PQ5T2L2 129 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 C1orf158Q8N1D5 194 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 LYPD1Q8N2G4 141 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 RPP25LQ8N5L8 163 aaKnown RBP6.34□□□□□ -1.39
SNX4-205ENST00000482965 C11orf45Q8TAV5 145 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 RAB24Q969Q5 203 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 ST6GAL2Q96JF0 529 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 NEU1Q99519 415 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 Q9H3A6 140 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 CYTL1Q9NRR1 136 aa6.34□□□□□ -1.39
SNX4-205ENST00000482965 IGKV2-40A0A087WW87 121 aaPredicted RBP6.33□□□□□ -1.4
SNX4-205ENST00000482965 BCL2L11O43521 198 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 PFDN1O60925 122 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 IGKV2D-40P01614 121 aaPredicted RBP6.33□□□□□ -1.4
SNX4-205ENST00000482965 STAG3L2P0CL84 134 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 STAG3L3P0CL85 134 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 CT45A10P0DMU9 189 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 LEPP41159 167 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 NANOS2P60321 138 aaKnown RBP6.33□□□□□ -1.4
SNX4-205ENST00000482965 ERCC8Q13216 396 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 RRN3P1Q2M238 152 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 FAM74A1Q5RGS3 127 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 TCTE3Q8IZS6 198 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 LINC00477Q96M19 166 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 ODF3Q96PU9 254 aa6.33□□□□□ -1.4
SNX4-205ENST00000482965 ZNF471Q9BX82 626 aaPredicted RBP6.33□□□□□ -1.4
SNX4-205ENST00000482965 CTXND1A0A1B0GTU2 59 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms