RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 RAB2AP61019 212 aa12.05□□□□□ -0.48
HMGN1-214ENST00000482733 AGRNO00468 2067 aa12.05□□□□□ -0.48
HMGN1-214ENST00000482733 BOLA2-SMG1P6H3BVE0 249 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 OR10J4P0C629 311 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 UBE2L3P68036 154 aaKnown RBP12.04□□□□□ -0.48
HMGN1-214ENST00000482733 FAM122CQ6P4D5 195 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 ZNF705AQ6ZN79 300 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-214ENST00000482733 PQLC2Q6ZP29 291 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 KCNRGQ8N5I3 272 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 IGF2BP2-AS1Q96M15 143 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 NEU1Q99519 415 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 GOLT1BQ9Y3E0 138 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 X6R8D5 127 aa12.04□□□□□ -0.48
HMGN1-214ENST00000482733 A0A0D9SG52 128 aa12.03□□□□□ -0.48
HMGN1-214ENST00000482733 SMIM9A6NGZ8 99 aa12.03□□□□□ -0.48
HMGN1-214ENST00000482733 CDC34P49427 236 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-214ENST00000482733 CASC10Q5T4H9 136 aa12.03□□□□□ -0.48
HMGN1-214ENST00000482733 Q8NAQ8 132 aa12.03□□□□□ -0.48
HMGN1-214ENST00000482733 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
HMGN1-214ENST00000482733 ARPC5LQ9BPX5 153 aa12.03□□□□□ -0.48
HMGN1-214ENST00000482733 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
HMGN1-214ENST00000482733 PRAC2D3DTV9 90 aa12.02□□□□□ -0.49
HMGN1-214ENST00000482733 INSP01308 110 aa12.02□□□□□ -0.49
HMGN1-214ENST00000482733 SPINK13Q1W4C9 94 aa12.02□□□□□ -0.49
HMGN1-214ENST00000482733 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
HMGN1-214ENST00000482733 OR11H4Q8NGC9 324 aa12.02□□□□□ -0.49
HMGN1-214ENST00000482733 CYTL1Q9NRR1 136 aa12.02□□□□□ -0.49
HMGN1-214ENST00000482733 IGHV4-28A0A0C4DH34 117 aa12.01□□□□□ -0.49
HMGN1-214ENST00000482733 M0R3E3 92 aa12.01□□□□□ -0.49
HMGN1-214ENST00000482733 TSPOP30536 169 aa12.01□□□□□ -0.49
HMGN1-214ENST00000482733 ICAM4Q14773 271 aa12.01□□□□□ -0.49
HMGN1-214ENST00000482733 EXOC3-AS1Q8N2X6 119 aa12.01□□□□□ -0.49
HMGN1-214ENST00000482733 PHYHIPLQ96FC7 376 aa12.01□□□□□ -0.49
HMGN1-214ENST00000482733 ST6GAL2Q96JF0 529 aa12.01□□□□□ -0.49
HMGN1-214ENST00000482733 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
HMGN1-214ENST00000482733 ACTR3CQ9C0K3 210 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-214ENST00000482733 NPIPB6E9PJ23 425 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 M0R2Z0 102 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 STAG3L2P0CL84 134 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 STAG3L3P0CL85 134 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 CDKN1BP46527 198 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 CSN1S1P47710 185 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 RANP62826 216 aaKnown RBP12□□□□□ -0.49
HMGN1-214ENST00000482733 ZFAND6Q6FIF0 208 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 TCTE3Q8IZS6 198 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 TMEM208Q9BTX3 173 aa12□□□□□ -0.49
HMGN1-214ENST00000482733 IGHV3OR16-12A0A075B7B8 117 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 KANTRA0A1W2PQU2 76 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 TMEM189A5PLL7 270 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 CRXO43186 299 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-214ENST00000482733 RBMY1A1P0DJD3 496 aaKnown RBP11.99□□□□□ -0.49
HMGN1-214ENST00000482733 RBMY1CP0DJD4 496 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 RBMY1FQ15415 496 aaKnown RBP11.99□□□□□ -0.49
HMGN1-214ENST00000482733 C1orf158Q8N1D5 194 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 C11orf45Q8TAV5 145 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 RAB24Q969Q5 203 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 LINC00477Q96M19 166 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 Q9H3A6 140 aa11.99□□□□□ -0.49
HMGN1-214ENST00000482733 DEFB4AO15263 64 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 BCL2L11O43521 198 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 EIF3GO75821 320 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGN1-214ENST00000482733 HBE1P02100 147 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-214ENST00000482733 LEPP41159 167 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 EIF5AP63241 154 aaKnown RBP11.98□□□□□ -0.49
HMGN1-214ENST00000482733 FAM74A1Q5RGS3 127 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 AKR1C8PQ5T2L2 129 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 TMEM256Q8N2U0 113 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 RXFP4Q8TDU9 374 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 C20orf144Q9BQM9 153 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 STARD9Q9P2P6 4700 aa11.98□□□□□ -0.49
HMGN1-214ENST00000482733 TRAV12-2A0A075B6T6 113 aa11.97□□□□□ -0.49
HMGN1-214ENST00000482733 CXorf65A6NEN9 183 aa11.97□□□□□ -0.49
HMGN1-214ENST00000482733 HMGB3O15347 200 aaKnown RBP11.97□□□□□ -0.49
HMGN1-214ENST00000482733 CXorf1O96002 111 aa11.97□□□□□ -0.49
HMGN1-214ENST00000482733 ARL14EPLP0DKL9 152 aa11.97□□□□□ -0.49
HMGN1-214ENST00000482733 CT45A10P0DMU9 189 aa11.97□□□□□ -0.49
HMGN1-214ENST00000482733 C9orf47Q6ZRZ4 202 aa11.97□□□□□ -0.49
HMGN1-214ENST00000482733 BAP18Q8IXM2 172 aa11.97□□□□□ -0.49
HMGN1-214ENST00000482733 OTORQ9NRC9 128 aa11.97□□□□□ -0.49
HMGN1-214ENST00000482733 PFDN1O60925 122 aa11.96□□□□□ -0.49
HMGN1-214ENST00000482733 RRN3P1Q2M238 152 aa11.96□□□□□ -0.49
HMGN1-214ENST00000482733 TMEM78Q5T7P6 136 aa11.96□□□□□ -0.49
HMGN1-214ENST00000482733 ARL6IP6Q8N6S5 226 aa11.96□□□□□ -0.49
HMGN1-214ENST00000482733 CMTM2Q8TAZ6 248 aa11.96□□□□□ -0.49
HMGN1-214ENST00000482733 SUN5Q8TC36 379 aa11.96□□□□□ -0.49
HMGN1-214ENST00000482733 ZNF471Q9BX82 626 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-214ENST00000482733 TMEM167BQ9NRX6 74 aa11.96□□□□□ -0.49
HMGN1-214ENST00000482733 CTXND1A0A1B0GTU2 59 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 RBAKDNA6NC62 111 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 NUPR2A6NF83 97 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 SLC25A5P05141 298 aaKnown RBP11.95□□□□□ -0.5
HMGN1-214ENST00000482733 GCHFRP30047 84 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 PMS2P11Q13670 270 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 TMUB2Q71RG4 321 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 AKAP14Q86UN6 197 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 LINC01587Q99440 93 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 AGPAT4-IT1Q9H0P7 198 aa11.95□□□□□ -0.5
HMGN1-214ENST00000482733 hCG_2014768A0A024R1R8 64 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms