RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 TMEM128Q5BJH2 165 aa1.35□□□□□ -2.19
RGPD6-209ENST00000480894 PBRM1Q86U86 1689 aa1.35□□□□□ -2.19
RGPD6-209ENST00000480894 NISCHQ9Y2I1 1504 aa1.35□□□□□ -2.19
RGPD6-209ENST00000480894 KLF7O75840 302 aaPredicted RBP1.34□□□□□ -2.19
RGPD6-209ENST00000480894 SDC2P34741 201 aa1.34□□□□□ -2.19
RGPD6-209ENST00000480894 PSG9Q00887 426 aa1.34□□□□□ -2.19
RGPD6-209ENST00000480894 OR9Q1Q8NGQ5 310 aa1.34□□□□□ -2.19
RGPD6-209ENST00000480894 GRPEL2Q8TAA5 225 aa1.34□□□□□ -2.19
RGPD6-209ENST00000480894 TAF9BQ9HBM6 251 aa1.34□□□□□ -2.19
RGPD6-209ENST00000480894 NCOA6Q14686 2063 aaPredicted RBP1.34□□□□□ -2.19
RGPD6-209ENST00000480894 IGLV3-32A0A0A0MS00 114 aa1.33□□□□□ -2.2
RGPD6-209ENST00000480894 S100GP29377 79 aa1.33□□□□□ -2.2
RGPD6-209ENST00000480894 POLR2HP52434 150 aaKnown RBP1.33□□□□□ -2.2
RGPD6-209ENST00000480894 DR1Q01658 176 aa1.33□□□□□ -2.2
RGPD6-209ENST00000480894 OR4B1Q8NGF8 309 aa1.33□□□□□ -2.2
RGPD6-209ENST00000480894 PSMF1Q92530 271 aa1.33□□□□□ -2.2
RGPD6-209ENST00000480894 DIRC1Q969H9 104 aa1.33□□□□□ -2.2
RGPD6-209ENST00000480894 TMEM138Q9NPI0 162 aa1.33□□□□□ -2.2
RGPD6-209ENST00000480894 MED31Q9Y3C7 131 aa1.33□□□□□ -2.2
RGPD6-209ENST00000480894 ZCCHC11Q5TAX3 1644 aaKnown RBP1.33□□□□□ -2.2
RGPD6-209ENST00000480894 ADGBQ8N7X0 1667 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 COL6A6A6NMZ7 2263 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 N4BP2Q86UW6 1770 aaPredicted RBP1.32□□□□□ -2.2
RGPD6-209ENST00000480894 GNG14A0A1W2PPG7 69 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 C5orf67F2Z3F1 127 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 SAMD13Q5VXD3 122 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 HRCT1Q6UXD1 115 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 LINC00305Q7Z4B0 112 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 LXNQ9BS40 222 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 MRPL40Q9NQ50 206 aaKnown RBP1.32□□□□□ -2.2
RGPD6-209ENST00000480894 TNFSF18Q9UNG2 199 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 NDUFAF1Q9Y375 327 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 TPRKBQ9Y3C4 175 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 PLXNA4Q9HCM2 1894 aa1.32□□□□□ -2.2
RGPD6-209ENST00000480894 CECR2Q9BXF3 1484 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 MGAMO43451 1857 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 FRMPD1Q5SYB0 1578 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 MCM3APO60318 1980 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 C9orf170A2RU37 121 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 FABP4P15090 132 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 RPL7P18124 248 aaKnown RBP1.31□□□□□ -2.2
RGPD6-209ENST00000480894 MIR22HGQ0VDD5 57 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 HAGHLQ6PII5 290 aaPredicted RBP1.31□□□□□ -2.2
RGPD6-209ENST00000480894 OR5H6Q8NGV6 325 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 CCL4L1Q8NHW4 92 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 OR4C12Q96R67 309 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 AMELYQ99218 206 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 BCL9O00512 1426 aa1.31□□□□□ -2.2
RGPD6-209ENST00000480894 HEATR1Q9H583 2144 aaKnown RBP1.3□□□□□ -2.2
RGPD6-209ENST00000480894 PRORSD1PA6NEY8 169 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 TSTD3H0UI37 97 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 NBEAP1P0C6P0 100 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 DIAPH2-AS1Q14236 149 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 FOXI2Q6ZQN5 318 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 LINC00269Q8N2A0 174 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 PLPP5Q8NEB5 264 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 SKA2Q8WVK7 121 aaPredicted RBP1.3□□□□□ -2.2
RGPD6-209ENST00000480894 PRELID3AQ96N28 172 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 CCDC115Q96NT0 180 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 CST11Q9H112 138 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 TRAPPC2LQ9UL33 140 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 FLG2Q5D862 2391 aaPredicted RBP1.3□□□□□ -2.2
RGPD6-209ENST00000480894 KIAA1107Q9UPP5 1409 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 FREM3P0C091 2139 aa1.3□□□□□ -2.2
RGPD6-209ENST00000480894 PIK3C2AO00443 1686 aa1.29□□□□□ -2.2
RGPD6-209ENST00000480894 A0A096LPI6 279 aa1.29□□□□□ -2.2
RGPD6-209ENST00000480894 TRBV27A0A0K0K1C4 114 aa1.29□□□□□ -2.2
RGPD6-209ENST00000480894 H3BMG7 143 aa1.29□□□□□ -2.2
RGPD6-209ENST00000480894 VMA21Q3ZAQ7 101 aa1.29□□□□□ -2.2
RGPD6-209ENST00000480894 TAC4Q86UU9 113 aa1.29□□□□□ -2.2
RGPD6-209ENST00000480894 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.28□□□□□ -2.2
RGPD6-209ENST00000480894 TRAV13-1A0A0B4J241 112 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 TRBV7-6A0A0J9YX20 115 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 C5orf58C9J3I9 102 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 IGHV3-33P01772 117 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 TMEM35BQ8NCS4 154 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 NIT2Q9NQR4 276 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 GINS2Q9Y248 185 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 HSPB11Q9Y547 144 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 MYLKQ15746 1914 aa1.28□□□□□ -2.2
RGPD6-209ENST00000480894 COL24A1Q17RW2 1714 aa1.27□□□□□ -2.21
RGPD6-209ENST00000480894 JMJD7-PLA2G4BH0Y9G9 81 aa1.27□□□□□ -2.21
RGPD6-209ENST00000480894 NCR3O14931 201 aa1.27□□□□□ -2.21
RGPD6-209ENST00000480894 TRACP01848 142 aa1.27□□□□□ -2.21
RGPD6-209ENST00000480894 TPT1P13693 172 aaKnown RBP1.27□□□□□ -2.21
RGPD6-209ENST00000480894 RPS3P23396 243 aaKnown RBP eCLIP1.27□□□□□ -2.21
RGPD6-209ENST00000480894 RPS28P62857 69 aaKnown RBP1.27□□□□□ -2.21
RGPD6-209ENST00000480894 TEX29Q8N6K0 151 aa1.27□□□□□ -2.21
RGPD6-209ENST00000480894 HSPB8Q9UJY1 196 aa1.27□□□□□ -2.21
RGPD6-209ENST00000480894 ALPK3Q96L96 1907 aa1.27□□□□□ -2.21
RGPD6-209ENST00000480894 HELZ2Q9BYK8 2649 aaKnown RBP1.26□□□□□ -2.21
RGPD6-209ENST00000480894 PPYP01298 95 aa1.26□□□□□ -2.21
RGPD6-209ENST00000480894 SRP9P49458 86 aaKnown RBP1.26□□□□□ -2.21
RGPD6-209ENST00000480894 MAXP61244 160 aa1.26□□□□□ -2.21
RGPD6-209ENST00000480894 WFDC10AQ9H1F0 79 aa1.26□□□□□ -2.21
RGPD6-209ENST00000480894 CASP8AP2Q9UKL3 1982 aa1.26□□□□□ -2.21
RGPD6-209ENST00000480894 PTPRFP10586 1907 aa1.25□□□□□ -2.21
RGPD6-209ENST00000480894 NUP210Q8TEM1 1887 aaPredicted RBP1.25□□□□□ -2.21
RGPD6-209ENST00000480894 FOXA3P55318 350 aaPredicted RBP1.25□□□□□ -2.21
RGPD6-209ENST00000480894 TMEM229BQ8NBD8 167 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms