RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 DNAJC15Q9Y5T4 150 aa3.12□□□□□ -1.91
SGIP1-209ENST00000480548 KDM5BQ9UGL1 1544 aa3.12□□□□□ -1.91
SGIP1-209ENST00000480548 MYO5AQ9Y4I1 1855 aaKnown RBP3.11□□□□□ -1.91
SGIP1-209ENST00000480548 MYO16Q9Y6X6 1858 aa3.11□□□□□ -1.91
SGIP1-209ENST00000480548 POLEQ07864 2286 aa3.11□□□□□ -1.91
SGIP1-209ENST00000480548 CDK6Q00534 326 aa3.11□□□□□ -1.91
SGIP1-209ENST00000480548 ZNF846Q147U1 533 aa3.11□□□□□ -1.91
SGIP1-209ENST00000480548 C1orf134Q5TEV5 83 aa3.11□□□□□ -1.91
SGIP1-209ENST00000480548 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
SGIP1-209ENST00000480548 RPS19BP1Q86WX3 136 aaKnown RBP3.11□□□□□ -1.91
SGIP1-209ENST00000480548 SBF1O95248 1867 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 CDK5RAP2Q96SN8 1893 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 TRACP01848 142 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 PCBD1P61457 104 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 IZUMO2Q6UXV1 221 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 LINC00311Q8N616 119 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 RAB37Q96AX2 223 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 TMEM191AQ9H0A3 160 aa3.1□□□□□ -1.91
SGIP1-209ENST00000480548 KDM6AO15550 1401 aaPredicted RBP3.1□□□□□ -1.91
SGIP1-209ENST00000480548 ANAPC1Q9H1A4 1944 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 A0A0G2JQZ4 141 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 CDC42EP2O14613 210 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 PLGLB1Q02325 96 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 OCIAD2Q56VL3 154 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 CLLU1Q5K131 121 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 SDF2Q99470 211 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 NABP2Q9BQ15 211 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 TCEAL7Q9BRU2 100 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 TIMM21Q9BVV7 248 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 CST9LQ9H4G1 147 aa3.09□□□□□ -1.91
SGIP1-209ENST00000480548 SOX21Q9Y651 276 aaPredicted RBP3.09□□□□□ -1.91
SGIP1-209ENST00000480548 F6UZH7 168 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 CD14P08571 375 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 CCL4P13236 92 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 DSCR4P56555 118 aaPredicted RBP3.08□□□□□ -1.92
SGIP1-209ENST00000480548 CIRBPQ14011 172 aaKnown RBP3.08□□□□□ -1.92
SGIP1-209ENST00000480548 DEFB113Q30KQ7 82 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 IDO2Q6ZQW0 420 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 C10orf111Q8N326 155 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 OR5AK2Q8NH90 309 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 MUCL1Q96DR8 90 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
SGIP1-209ENST00000480548 METTL1Q9UBP6 276 aaKnown RBP3.08□□□□□ -1.92
SGIP1-209ENST00000480548 COL1A1P02452 1464 aaPredicted RBP3.08□□□□□ -1.92
SGIP1-209ENST00000480548 PTPRBP23467 1997 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 IGKV3D-11A0A0A0MRZ8 115 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 A0A0G2JMM0 328 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 A0A1W2PPB8 328 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 KIR3DP1A8MWS1 328 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 E7EUB6 86 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 M0R129 80 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 IGLV3-19P01714 112 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 CKS2P33552 79 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 MRPS10P82664 201 aaKnown RBP3.07□□□□□ -1.92
SGIP1-209ENST00000480548 CST11Q9H112 138 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 SLC35B3Q9H1N7 401 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 CCDC167Q9P0B6 97 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 TMEM2Q9UHN6 1383 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 GRIN2AQ12879 1464 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 FANCMQ8IYD8 2048 aa3.07□□□□□ -1.92
SGIP1-209ENST00000480548 PNMA8CA0A1B0GUJ8 204 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 BBIP1A8MTZ0 92 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 RBP4P02753 201 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 CD3DP04234 171 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 APODP05090 189 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 RNASE2P10153 161 aaKnown RBP3.06□□□□□ -1.92
SGIP1-209ENST00000480548 ETV6P41212 452 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 ZNF518AQ6AHZ1 1483 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 OR5AS1Q8N127 324 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 TCTEX1D1Q8N7M0 179 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 LINC00304Q8N9R0 145 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 CCDC88CQ9P219 2028 aa3.06□□□□□ -1.92
SGIP1-209ENST00000480548 LSM2Q9Y333 95 aaKnown RBP3.06□□□□□ -1.92
SGIP1-209ENST00000480548 SMARCA2P51531 1590 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 TRBV20-1A0A075B6N2 111 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 TRAV12-1A0A0B4J245 112 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 TCRBV4S1A1TA0A5B7 111 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 ELOBQ15370 118 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 ARPINQ7Z6K5 226 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 ATOH7Q8N100 152 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.05□□□□□ -1.92
SGIP1-209ENST00000480548 OTOSQ8NHW6 89 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 SFT2D1Q8WV19 159 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 NOTCH3Q9UM47 2321 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 SPEF2Q9C093 1822 aa3.05□□□□□ -1.92
SGIP1-209ENST00000480548 SMARCA4P51532 1647 aa3.04□□□□□ -1.92
SGIP1-209ENST00000480548 KDM5CP41229 1560 aa3.04□□□□□ -1.92
SGIP1-209ENST00000480548 RGS12O14924 1447 aa3.04□□□□□ -1.92
SGIP1-209ENST00000480548 ARHGAP31Q2M1Z3 1444 aa3.04□□□□□ -1.92
SGIP1-209ENST00000480548 C5orf67F2Z3F1 127 aa3.04□□□□□ -1.92
SGIP1-209ENST00000480548 PYYP10082 97 aa3.04□□□□□ -1.92
SGIP1-209ENST00000480548 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
SGIP1-209ENST00000480548 CLECL1Q8IZS7 167 aa3.04□□□□□ -1.92
SGIP1-209ENST00000480548 PDCD10Q9BUL8 212 aa3.04□□□□□ -1.92
SGIP1-209ENST00000480548 RIMS1Q86UR5 1692 aaKnown RBP3.04□□□□□ -1.92
SGIP1-209ENST00000480548 UHRF1BP1LA0JNW5 1464 aa3.03□□□□□ -1.92
SGIP1-209ENST00000480548 RTEL1-TNFRSF6BF6WH68 1400 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms