RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 GAGE1Q13065 139 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 LAMTOR3Q9UHA4 124 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 ZNF474Q6S9Z5 364 aaPredicted RBP11□□□□□ -0.65
MCF2L-225ENST00000480321 FAM110DQ8TAY7 271 aaPredicted RBP11□□□□□ -0.65
MCF2L-225ENST00000480321 FCN3O75636 299 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 COL8A2P25067 703 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 C1QTNF4Q9BXJ3 329 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 BPESC1Q9GZL8 116 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 ARMS2P0C7Q2 107 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 ERCC8Q13216 396 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 C5orf24Q7Z6I8 188 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
MCF2L-225ENST00000480321 LINC00311Q8N616 119 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 TRAV8-3A0A0A6YYJ7 113 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 CGB7P0DN87 165 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 IGLC2P0DOY2 106 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 IGLC3P0DOY3 106 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 V9GYV3 84 aa11□□□□□ -0.65
MCF2L-225ENST00000480321 LY6HO94772 140 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 LGALS9BQ3B8N2 356 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 LGALS9CQ6DKI2 356 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 UBE2E2Q96LR5 201 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 C9orf118A6NHY6 69 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 IGKV1-16P04430 117 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 CGB3P0DN86 165 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 ZNF726P1Q15940 193 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 DAZ1Q9NQZ3 744 aaKnown RBP10.99□□□□□ -0.65
MCF2L-225ENST00000480321 SNHG12Q9BXW3 62 aa10.99□□□□□ -0.65
MCF2L-225ENST00000480321 TRBV19A0A075B6N1 114 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 MSRB2Q9Y3D2 182 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 RHODO00212 210 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 CEACAM8P31997 349 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-225ENST00000480321 TAL2Q16559 108 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 RNF166Q96A37 237 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-225ENST00000480321 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 GAGE2AQ6NT46 116 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 LYPD2Q6UXB3 125 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 OR11H6Q8NGC7 330 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 SCN5AQ14524 2016 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 VWC2LB2RUY7 222 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 LYPD6BQ8NI32 183 aa10.98□□□□□ -0.65
MCF2L-225ENST00000480321 MCRIP2Q9BUT9 160 aaKnown RBP10.98□□□□□ -0.65
MCF2L-225ENST00000480321 RHPN1-AS1Q9BWJ2 59 aa10.97□□□□□ -0.65
MCF2L-225ENST00000480321 IGHV1-24A0A0C4DH33 117 aa10.97□□□□□ -0.65
MCF2L-225ENST00000480321 DEFB130BP0DP73 79 aa10.97□□□□□ -0.65
MCF2L-225ENST00000480321 DEFB130AP0DP74 79 aa10.97□□□□□ -0.65
MCF2L-225ENST00000480321 COX8AP10176 69 aa10.97□□□□□ -0.65
MCF2L-225ENST00000480321 IGLV3-1P01715 115 aa10.97□□□□□ -0.65
MCF2L-225ENST00000480321 SAA4P35542 130 aa10.97□□□□□ -0.65
MCF2L-225ENST00000480321 SP5Q6BEB4 398 aaPredicted RBP10.97□□□□□ -0.65
MCF2L-225ENST00000480321 TSC2P49815 1807 aa10.96□□□□□ -0.65
MCF2L-225ENST00000480321 F8W1H4 67 aa10.96□□□□□ -0.65
MCF2L-225ENST00000480321 SMKR1H3BMG3 65 aa10.96□□□□□ -0.65
MCF2L-225ENST00000480321 SIVA1O15304 175 aa10.96□□□□□ -0.65
MCF2L-225ENST00000480321 ZNF625Q96I27 306 aaPredicted RBP10.96□□□□□ -0.65
MCF2L-225ENST00000480321 COL6A6A6NMZ7 2263 aa10.96□□□□□ -0.65
MCF2L-225ENST00000480321 LINC00479Q96M42 142 aa10.96□□□□□ -0.65
MCF2L-225ENST00000480321 C6orf226Q5I0X4 101 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 ARFGEF3Q5TH69 2177 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 C9JAW5 83 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 RNF223E7ERA6 249 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 MLANAQ16655 118 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 Q6ZWC4 215 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 IGKV1-39P01597 117 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 IGKV1D-39P04432 117 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 LINC00205P59089 165 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 IL15RAQ13261 267 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 THAP8Q8NA92 274 aa10.96□□□□□ -0.66
MCF2L-225ENST00000480321 E7EQL1 145 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 CFHR2P36980 270 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 IL17RELQ6ZVW7 336 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 RSPO3Q9BXY4 272 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-225ENST00000480321 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 INAFM2P0DMQ5 153 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 SRSF2Q01130 221 aaKnown RBP10.95□□□□□ -0.66
MCF2L-225ENST00000480321 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 PMVKQ15126 192 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 IGFL4Q6B9Z1 124 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 VWA8A3KMH1 1905 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 H3BRN7 92 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 LHBP01229 141 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 UBE2E1P51965 193 aa10.95□□□□□ -0.66
MCF2L-225ENST00000480321 C9orf153Q5TBE3 101 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 KLF12Q9Y4X4 402 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 NOTCH3Q9UM47 2321 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 GATA3P23771 443 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 POU2AF1Q16633 256 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 STPG4Q8N801 248 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 C1orf159Q96HA4 380 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 TEX36Q5VZQ5 186 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 RLFQ13129 1914 aa10.94□□□□□ -0.66
MCF2L-225ENST00000480321 TP53BP1Q12888 1972 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-225ENST00000480321 K7EP34 96 aa10.93□□□□□ -0.66
MCF2L-225ENST00000480321 C2orf66Q6UXQ4 117 aa10.93□□□□□ -0.66
MCF2L-225ENST00000480321 Q71RC1 249 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-225ENST00000480321 WIPF2Q8TF74 440 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-225ENST00000480321 PPDPFLQ8WWR9 84 aa10.93□□□□□ -0.66
MCF2L-225ENST00000480321 CYYR1Q96J86 154 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms