RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ADARB2-AS1A8MUL3 147 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 H3BQ85 93 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 FOXG1P55316 489 aaPredicted RBP4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 RSPO3Q9BXY4 272 aaPredicted RBP4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 CSTL1Q9H114 145 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 COL5A3P25940 1745 aaPredicted RBP4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 IGLC1P0CG04 106 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 MALP21145 153 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 HAPLN4Q86UW8 402 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 A0A087WX48 190 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 TRAV3A0A0B4J244 114 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 NCR2O95944 276 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 C9orf153Q5TBE3 101 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 NAV2Q8IVL1 2488 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 B4DSR2 109 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 GAGE2AQ6NT46 116 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 IGLV1-44P01699 117 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 PHLDA1Q8WV24 401 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 CHCHD5Q9BSY4 110 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 MIA3Q5JRA6 1907 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 PAX4O43316 350 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 SELLP14151 372 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 RSPO1Q2MKA7 263 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 IGFL3Q6UXB1 125 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 ZNF638Q14966 1978 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 ATP5G1P05496 136 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 TEN1Q86WV5 123 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 TSSC4Q9Y5U2 329 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 VWC2LB2RUY7 222 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 H0YGX0 51 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 H3BRN7 92 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 UBE2E1P51965 193 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 ATP6V0E2Q8NHE4 81 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 PRDM6Q9NQX0 595 aa4.95□□□□□ -1.62
PRPF4B-205ENST00000480058 SHANK3Q9BYB0 1731 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 TRGV4A0A0C4DH28 118 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 SDHAF1A6NFY7 115 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 H3BT86 120 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 INSP01308 110 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 LTAP01374 205 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 LINC00158P58513 81 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 C15orf65H3BRN8 121 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 NDUFA4O00483 81 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 RHPN1-AS1Q9BWJ2 59 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 NAV3Q8IVL0 2385 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 TRAV13-2A0A0B4J235 113 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 TRAV40A0A0B4J280 105 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 PRSS47A8MTI9 375 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 CD59P13987 128 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 C6orf226Q5I0X4 101 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 C14orf178Q8N769 122 aaPredicted RBP4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 COL4A1P02462 1669 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 CUL9Q8IWT3 2517 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 IGHV3-49A0A0A0MS15 119 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 J3QQQ9 107 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 IGHV4-39P01824 125 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 CFC1BP0CG36 223 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 CFC1P0CG37 223 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 MRPL51Q4U2R6 128 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 CDKN1AP38936 164 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 MRPL35Q9NZE8 188 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 SPRR3Q9UBC9 169 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 NDUFA12Q9UI09 145 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 LOC285556D6RIA3 1793 aa4.94□□□□□ -1.62
PRPF4B-205ENST00000480058 TRAV12-1A0A0B4J245 112 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 C5orf63A6NC05 138 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 CEACAM8P31997 349 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 WT1-ASQ06250 92 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 ZNF114Q8NC26 417 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 RCHY1Q96PM5 261 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 MYO7BQ6PIF6 2116 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 WIPF3A6NGB9 483 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 IGKV1-16P04430 117 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 AZU1P20160 251 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 LY6EQ16553 131 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 STHQ8IWL8 128 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 RNF152Q8N8N0 203 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 ITLN2Q8WWU7 325 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 FXYD5Q96DB9 178 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 ZNFX1Q9P2E3 1918 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 IGKV2-40A0A087WW87 121 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 I3L3M4 83 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 IGKV2D-40P01614 121 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 MED14OSP0DP75 135 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 WNK3Q9BYP7 1800 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 IGHV3OR16-12A0A075B7B8 117 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 EPOPA6NHQ4 379 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 FCN3O75636 299 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 MRPL23Q16540 153 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 C12orf74Q32Q52 190 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 RNF144BQ7Z419 303 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 LINC01560Q8TB33 94 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 KIAA2026Q5HYC2 2103 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 TET1Q8NFU7 2136 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 ZNF688P0C7X2 276 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 ERCC8Q13216 396 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 SMIM20Q8N5G0 67 aa4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 SPAG8Q99932 426 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-205ENST00000480058 PARP14Q460N5 1801 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms