RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 FAM74A7A6NL05 159 aa13.78□□□□□ -0.2
RUNX3-204ENST00000479341 ZNF705FA8MVS1 300 aaPredicted RBP13.78□□□□□ -0.2
RUNX3-204ENST00000479341 PPT1P50897 306 aa13.78□□□□□ -0.2
RUNX3-204ENST00000479341 ZNF767PQ75MW2 155 aa13.78□□□□□ -0.2
RUNX3-204ENST00000479341 ZNF738Q8NE65 137 aa13.78□□□□□ -0.2
RUNX3-204ENST00000479341 RPUSD4Q96CM3 377 aaKnown RBP13.78□□□□□ -0.2
RUNX3-204ENST00000479341 ARL2-SNX15V9GYD0 113 aa13.78□□□□□ -0.2
RUNX3-204ENST00000479341 PRKDCP78527 4128 aaKnown RBP13.77□□□□□ -0.2
RUNX3-204ENST00000479341 KNCNA6PVL3 124 aa13.77□□□□□ -0.21
RUNX3-204ENST00000479341 GGTLC3B5MD39 225 aa13.77□□□□□ -0.21
RUNX3-204ENST00000479341 PRAC2D3DTV9 90 aa13.77□□□□□ -0.21
RUNX3-204ENST00000479341 K7EIL1 84 aa13.77□□□□□ -0.21
RUNX3-204ENST00000479341 NMBP08949 121 aa13.77□□□□□ -0.21
RUNX3-204ENST00000479341 UBE2G2P60604 165 aa13.77□□□□□ -0.21
RUNX3-204ENST00000479341 FOXI2Q6ZQN5 318 aa13.77□□□□□ -0.21
RUNX3-204ENST00000479341 PCNPQ8WW12 178 aaKnown RBP13.77□□□□□ -0.21
RUNX3-204ENST00000479341 SAV1Q9H4B6 383 aaPredicted RBP13.77□□□□□ -0.21
RUNX3-204ENST00000479341 F6UB75 175 aa13.76□□□□□ -0.21
RUNX3-204ENST00000479341 PAGE4O60829 102 aa13.76□□□□□ -0.21
RUNX3-204ENST00000479341 SUMO1P63165 101 aaKnown RBP13.76□□□□□ -0.21
RUNX3-204ENST00000479341 GDF5OSQ5U4N7 250 aa13.76□□□□□ -0.21
RUNX3-204ENST00000479341 ARL6IP6Q8N6S5 226 aa13.76□□□□□ -0.21
RUNX3-204ENST00000479341 GNG13Q9P2W3 67 aa13.76□□□□□ -0.21
RUNX3-204ENST00000479341 A0A0J9YX75 114 aa13.75□□□□□ -0.21
RUNX3-204ENST00000479341 A8MZ25 164 aa13.75□□□□□ -0.21
RUNX3-204ENST00000479341 PRB4P10163 310 aaPredicted RBP13.75□□□□□ -0.21
RUNX3-204ENST00000479341 ACTL10Q5JWF8 245 aa13.75□□□□□ -0.21
RUNX3-204ENST00000479341 OR8A1Q8NGG7 326 aa13.75□□□□□ -0.21
RUNX3-204ENST00000479341 RXFP4Q8TDU9 374 aa13.75□□□□□ -0.21
RUNX3-204ENST00000479341 NKX6-2Q9C056 277 aaPredicted RBP13.75□□□□□ -0.21
RUNX3-204ENST00000479341 SRD5A3Q9H8P0 318 aa13.75□□□□□ -0.21
RUNX3-204ENST00000479341 MANBALQ9NQG1 85 aa13.75□□□□□ -0.21
RUNX3-204ENST00000479341 DNAH3Q8TD57 4116 aa13.75□□□□□ -0.21
RUNX3-204ENST00000479341 H3BMM0 161 aa13.74□□□□□ -0.21
RUNX3-204ENST00000479341 IGHV4-30-4P0DP06 118 aa13.74□□□□□ -0.21
RUNX3-204ENST00000479341 HLA-DRB4P13762 266 aa13.74□□□□□ -0.21
RUNX3-204ENST00000479341 CSN1S1P47710 185 aa13.74□□□□□ -0.21
RUNX3-204ENST00000479341 EBLN2Q6P2I7 272 aa13.74□□□□□ -0.21
RUNX3-204ENST00000479341 CCDC28AQ8IWP9 274 aa13.74□□□□□ -0.21
RUNX3-204ENST00000479341 C5orf17Q8NAS9 161 aa13.74□□□□□ -0.21
RUNX3-204ENST00000479341 HLA-DRB4X5D2U9 266 aa13.74□□□□□ -0.21
RUNX3-204ENST00000479341 A8MTW9 85 aa13.73□□□□□ -0.21
RUNX3-204ENST00000479341 DIRC3C9JPN6 131 aa13.73□□□□□ -0.21
RUNX3-204ENST00000479341 SLC25A5P05141 298 aaKnown RBP13.73□□□□□ -0.21
RUNX3-204ENST00000479341 ZNF705DP0CH99 300 aaPredicted RBP13.73□□□□□ -0.21
RUNX3-204ENST00000479341 ZNF705BP0CI00 300 aaPredicted RBP13.73□□□□□ -0.21
RUNX3-204ENST00000479341 CST9LP1Q5W188 147 aa13.73□□□□□ -0.21
RUNX3-204ENST00000479341 CMTM2Q8TAZ6 248 aa13.73□□□□□ -0.21
RUNX3-204ENST00000479341 CLUHP3Q96NS8 147 aa13.73□□□□□ -0.21
RUNX3-204ENST00000479341 EPDR1Q9UM22 224 aa13.73□□□□□ -0.21
RUNX3-204ENST00000479341 AGRNO00468 2067 aa13.73□□□□□ -0.21
RUNX3-204ENST00000479341 RBMY1BA6NDE4 496 aaKnown RBP13.72□□□□□ -0.21
RUNX3-204ENST00000479341 RBMY1EA6NEQ0 496 aaKnown RBP13.72□□□□□ -0.21
RUNX3-204ENST00000479341 DUSP14O95147 198 aaKnown RBP13.72□□□□□ -0.21
RUNX3-204ENST00000479341 RBMY1DP0C7P1 496 aaKnown RBP13.72□□□□□ -0.21
RUNX3-204ENST00000479341 ATP5G3P48201 142 aa13.72□□□□□ -0.21
RUNX3-204ENST00000479341 LINC00322Q6ZN03 302 aaPredicted RBP13.72□□□□□ -0.21
RUNX3-204ENST00000479341 TRPT1Q86TN4 253 aaKnown RBP13.72□□□□□ -0.21
RUNX3-204ENST00000479341 TUBA4BQ9H853 241 aa13.72□□□□□ -0.21
RUNX3-204ENST00000479341 IFNA1P01562 189 aa13.71□□□□□ -0.21
RUNX3-204ENST00000479341 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
RUNX3-204ENST00000479341 RAB14P61106 215 aa13.71□□□□□ -0.21
RUNX3-204ENST00000479341 GNG5P63218 68 aa13.71□□□□□ -0.21
RUNX3-204ENST00000479341 HIST1H1AQ02539 215 aaPredicted RBP13.71□□□□□ -0.21
RUNX3-204ENST00000479341 STHQ8IWL8 128 aa13.71□□□□□ -0.21
RUNX3-204ENST00000479341 OR10J6PQ8NGY7 276 aa13.71□□□□□ -0.21
RUNX3-204ENST00000479341 IGKV2-40A0A087WW87 121 aaPredicted RBP13.7□□□□□ -0.22
RUNX3-204ENST00000479341 LOC102723971A0A1B0GUV8 181 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 RBAKDNA6NC62 111 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 NPIPB6E9PJ23 425 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 RGS13O14921 159 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 IGKV2D-40P01614 121 aaPredicted RBP13.7□□□□□ -0.22
RUNX3-204ENST00000479341 TCRAP04437 139 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 BCL2P10415 239 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 TAGLN2P37802 199 aaKnown RBP13.7□□□□□ -0.22
RUNX3-204ENST00000479341 HAGHQ16775 308 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 CLLU1Q5K131 121 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 TXNDC17Q9BRA2 123 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 TCEAL7Q9BRU2 100 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 VAX2Q9UIW0 290 aa13.7□□□□□ -0.22
RUNX3-204ENST00000479341 LOC102724200A0A096LPH7 203 aaPredicted RBP13.69□□□□□ -0.22
RUNX3-204ENST00000479341 C11orf94C9JXX5 98 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
RUNX3-204ENST00000479341 ERCC8Q13216 396 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 AMTNQ6UX39 209 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 C9orf47Q6ZRZ4 202 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 GOLT1AQ6ZVE7 132 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 OR4B1Q8NGF8 309 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 VGLL1Q99990 258 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 AGPAT4-IT1Q9H0P7 198 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 RPH3ALQ9UNE2 315 aa13.69□□□□□ -0.22
RUNX3-204ENST00000479341 SERTM2A0A1B0GWG4 89 aa13.68□□□□□ -0.22
RUNX3-204ENST00000479341 RBFOX3A6NFN3 312 aa13.68□□□□□ -0.22
RUNX3-204ENST00000479341 IGKV3-20P01619 116 aa13.68□□□□□ -0.22
RUNX3-204ENST00000479341 HIST1H2BAQ96A08 127 aa13.68□□□□□ -0.22
RUNX3-204ENST00000479341 LINC00477Q96M19 166 aa13.68□□□□□ -0.22
RUNX3-204ENST00000479341 RARRES2Q99969 163 aa13.68□□□□□ -0.22
RUNX3-204ENST00000479341 ATG101Q9BSB4 218 aa13.68□□□□□ -0.22
RUNX3-204ENST00000479341 PEX7O00628 323 aa13.67□□□□□ -0.22
RUNX3-204ENST00000479341 FRMD6-AS1P0C7T7 363 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms