RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 A0A1B0GUT8 65 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 NCR2O95944 276 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 CTSGP08311 255 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 TMEM11P17152 192 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 UQCRFS1P47985 274 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 MFAP4P55083 255 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 SMAD5-AS1Q9Y6J3 95 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 CCL25O15444 150 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 ECSCRQ19T08 205 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 CT83Q5H943 113 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 MRPL52Q86TS9 123 aaKnown RBP8.43□□□□□ -1.06
VPS52-217ENST00000478934 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 IGHV3-49A0A0A0MS15 119 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 C19orf84I3L1E1 186 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 C16orf54Q6UWD8 224 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 Q8N6K4 173 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 AJUBAQ96IF1 538 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 VGLL1Q99990 258 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 G3V318 75 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 HAX1O00165 279 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 IFI27P40305 119 aaPredicted RBP8.42□□□□□ -1.06
VPS52-217ENST00000478934 GAGE1Q13065 139 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 AMN1Q8IY45 258 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 TTC9CQ8N5M4 171 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 NEU4Q8WWR8 484 aaPredicted RBP8.42□□□□□ -1.06
VPS52-217ENST00000478934 SRSF8Q9BRL6 282 aaKnown RBP8.42□□□□□ -1.06
VPS52-217ENST00000478934 GFRA4Q9GZZ7 299 aa8.42□□□□□ -1.06
VPS52-217ENST00000478934 NPIPB5A8MRT5 1133 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 GPR183P32249 361 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 ZNF80P51504 273 aaPredicted RBP8.41□□□□□ -1.06
VPS52-217ENST00000478934 NHLH1Q02575 133 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 LYZL1Q6UWQ5 148 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 WFDC3Q8IUB2 231 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 Q8N9W7 124 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 NDFIP1Q9BT67 221 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 SELENOKQ9Y6D0 94 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 D6R8Y8 96 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 IGHG4P01861 327 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 PTTG1IPP53801 180 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 PRSS3P2Q8NHM4 247 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 CHCHD1Q96BP2 118 aaKnown RBP8.41□□□□□ -1.06
VPS52-217ENST00000478934 BPESC1Q9GZL8 116 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 SIRPDQ9H106 197 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 LINC00527Q9UJ94 153 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 PKD1L2Q7Z442 2459 aa8.41□□□□□ -1.06
VPS52-217ENST00000478934 A0A087X0K7 114 aa8.4□□□□□ -1.06
VPS52-217ENST00000478934 ZNF207O43670 478 aaKnown RBP8.4□□□□□ -1.06
VPS52-217ENST00000478934 NUDT3O95989 172 aa8.4□□□□□ -1.06
VPS52-217ENST00000478934 C21orf62-AS1Q17RA5 79 aa8.4□□□□□ -1.06
VPS52-217ENST00000478934 RNF182Q8N6D2 247 aa8.4□□□□□ -1.06
VPS52-217ENST00000478934 OR8A1Q8NGG7 326 aa8.4□□□□□ -1.06
VPS52-217ENST00000478934 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.06
VPS52-217ENST00000478934 MRPS16Q9Y3D3 137 aaKnown RBP8.4□□□□□ -1.06
VPS52-217ENST00000478934 C20orf202A1L168 122 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 PRAC2D3DTV9 90 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 SH2D1AO60880 128 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 SAA4P35542 130 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 ERCC8Q13216 396 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 DTX2Q86UW9 622 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 TMEM219Q86XT9 240 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.07
VPS52-217ENST00000478934 SOX21Q9Y651 276 aaPredicted RBP8.4□□□□□ -1.07
VPS52-217ENST00000478934 K7EQM0 130 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 ATP6V0E1O15342 81 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 CLEC3BP05452 202 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 PPIFP30405 207 aaKnown RBP8.39□□□□□ -1.07
VPS52-217ENST00000478934 C15orf32Q32M92 178 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 AAMDCQ9H7C9 122 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 CRXO43186 299 aaPredicted RBP8.39□□□□□ -1.07
VPS52-217ENST00000478934 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 OR5AL1P0C617 328 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 CT45A10P0DMU9 189 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
VPS52-217ENST00000478934 RIGQ13278 110 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 ZNF575Q86XF7 245 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 MSRB1Q9NZV6 116 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 COX11Q9Y6N1 276 aa8.39□□□□□ -1.07
VPS52-217ENST00000478934 CENPEQ02224 2701 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 CBY3A6NI87 242 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 UCNP55089 124 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 CCDC144NLQ6NUI1 221 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 FA2HQ7L5A8 372 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 TMEM191AQ9H0A3 160 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 ABCA2Q9BZC7 2435 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 TMEM189A5PLL7 270 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 FAM231BA6NCW3 169 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 RHOGP84095 191 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 EBI3Q14213 229 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 LYPD1Q8N2G4 141 aa8.38□□□□□ -1.07
VPS52-217ENST00000478934 A0A096LNJ9 63 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 IGHV2-70DA0A0C4DH43 119 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 LMO4P61968 165 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 CLEC19AQ6UXS0 136 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 Q6ZQT7 251 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 PRR25Q96S07 402 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 SIGLEC8Q9NYZ4 499 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 TRBV6-1A0A0K0K1D8 114 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms