RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 M0QZK8 103 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 PSPHP1O15172 72 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 FGF16O43320 207 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 MPC2O95563 127 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 GCGP01275 180 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 S100A6P06703 90 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 NMBP08949 121 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 IL3RAP26951 378 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 BRS3P32247 399 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF93P35789 620 aaPredicted RBP2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF137PP52743 207 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 ACTBP60709 375 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 TSPAN5P62079 268 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 RPS11P62280 158 aaKnown RBP eCLIP2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 RPS25P62851 125 aaKnown RBP2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 PAFAH1B2P68402 229 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 EDDM3AQ14507 147 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 RSU1Q15404 277 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 HMGN3Q15651 99 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 CDNFQ49AH0 187 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 IDNKQ5T6J7 187 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 EIF5AL1Q6IS14 154 aaKnown RBP2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF880Q6PDB4 577 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 ANGPTL5Q86XS5 388 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 LYPD6Q86Y78 171 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 GAPTQ8N292 157 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 OSR2Q8N2R0 312 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 SVBPQ8N300 66 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 DRAM1Q8N682 238 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR4D6Q8NGJ1 314 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR5D18Q8NGL1 313 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR2T35Q8NGX2 323 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 STOML3Q8TAV4 291 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 TNFAIP8L1Q8WVP5 186 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 S100A16Q96FQ6 103 aaKnown RBP2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 C18orf15Q96N68 181 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 DERL3Q96Q80 235 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 SPACA5Q96QH8 159 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 GPER1Q99527 375 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 S100A13Q99584 98 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 SULT4A1Q9BR01 284 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 CHST6Q9GZX3 395 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 CST11Q9H112 138 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 METTL9Q9H1A3 318 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 SMDT1Q9H4I9 107 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 TUBA4BQ9H853 241 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF286AQ9HBT8 521 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 BIN3Q9NQY0 253 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 IDI2-AS1Q9NZ38 188 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 KLF12Q9Y4X4 402 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 SOX21Q9Y651 276 aaPredicted RBP2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 SORL1Q92673 2214 aa2.29□□□□□ -2.04
CDC42BPA-212ENST00000478573 VWFP04275 2813 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 TRAV8-7A0A075B6U6 113 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 TRBV6-7A0A0A0MS04 114 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 IFITM5A6NNB3 132 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 COLCA2A8K830 154 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 G3V3Q6 166 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 BUB1B-PAK6H3BSN5 160 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 ITGB1BP1O14713 200 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 DEGS1O15121 323 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 GATCO43716 136 aaKnown RBP2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 SSNA1O43805 119 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 PDCD6O75340 191 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 NDUFS6O75380 124 aaKnown RBP2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 RBBP9O75884 186 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR7C1O76099 320 aaPredicted RBP2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 AKAIN1P0CW23 69 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 SMIM6P0DI80 62 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 CGB3P0DN86 165 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 CGB7P0DN87 165 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 GTF2F2P13984 249 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 CDK2P24941 298 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 RAB13P51153 203 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 SLC35B1P78383 322 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 ATP6V1FQ16864 119 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 PIGYQ3MUY2 71 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 ACSM3Q53FZ2 586 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 LDLRAD2Q5SZI1 272 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 GLT8D1Q68CQ7 371 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 NDUFA11Q86Y39 141 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 DYNAPQ8N1N2 210 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 KCNRGQ8N5I3 272 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 LINC00469Q8N7U9 141 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 SPANXA2-OT1Q8N9U9 137 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 TMEM229BQ8NBD8 167 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 GHSRQ92847 366 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 PDCD10Q9BUL8 212 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 SEC11CQ9BY50 192 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 ARV1Q9H2C2 271 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 HRASLSQ9HDD0 168 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 VAX2Q9UIW0 290 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 JPT1Q9UK76 154 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 FLVCR2Q9UPI3 526 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 S4R3C0 116 aa2.28□□□□□ -2.04
CDC42BPA-212ENST00000478573 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGHV3-49A0A0A0MS15 119 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 PIGBOS1A0A0B4J2F0 54 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF98A6NK75 572 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms