RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 LYNX1G3V0Z9 82 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 M0QZK8 103 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 M0R143 59 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 CCL21O00585 134 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 TIMM23O14925 209 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 NBR2O15453 112 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 ZNF324O75467 553 aaPredicted RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 NDUFA3O95167 84 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 CNIH1O95406 144 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 LTAP01374 205 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 TCRAP04437 139 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 FRMD6-AS1P0C7T7 363 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 LYNX1P0DP58 116 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 PSG1P11464 419 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 PPIFP30405 207 aaKnown RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 AMTP48728 403 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 KRTAP10-9P60411 292 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 KRTAP10-11P60412 298 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 LYZP61626 148 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 GNG5P63218 68 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 SLC35B1P78383 322 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 FHL3Q13643 280 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 KLF5Q13887 457 aaPredicted RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 DGAT2L7PQ6IED9 249 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 PRR27Q6MZM9 219 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 ZNF600Q6ZNG1 722 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 Q71RC1 249 aaPredicted RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 LYPD1Q8N2G4 141 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 KIR3DL3Q8N743 410 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 NPBQ8NG41 125 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 DAZAP1Q96EP5 407 aaKnown RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 LINC00479Q96M42 142 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 VAMP8Q9BV40 100 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 MLST8Q9BVC4 326 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 SLC25A39Q9BZJ4 359 aaPredicted RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 GFRA4Q9GZZ7 299 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 RPP21Q9H633 154 aaKnown RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 NRN1Q9NPD7 142 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 CBLN4Q9NTU7 201 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 TBL2Q9Y4P3 447 aaKnown RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 PRRC2AP48634 2157 aaKnown RBP3.89□□□□□ -1.79
SF3B6-202ENST00000478050 LOC105371242A0A075B767 164 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 IGHV3-21A0A0B4J1V1 117 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 A0A1B0GV90 55 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 A0A1W2PS18 150 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 C19orf71A6NCJ1 209 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 NPIPB5A8MRT5 1133 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 HIGD1CA8MV81 97 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 ODF3BA8MYP8 253 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 DIRC3C9JPN6 131 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 H3BRN7 92 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 K7EIM0 57 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 K7EQM0 130 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 TRIAP1O43715 76 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 SCGB2A1O75556 95 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 CA1P00915 261 aaPredicted RBP3.88□□□□□ -1.79
SF3B6-202ENST00000478050 P01737 135 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 APELAP0DMC3 54 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 RAB4AP20338 218 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 PMCHP20382 165 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 PRTN3P24158 256 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 GPR6P46095 362 aaPredicted RBP3.88□□□□□ -1.79
SF3B6-202ENST00000478050 DLX1P56177 255 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 KRTDAPP60985 99 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 HBBP68871 147 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 ADORA2A-AS1P86434 159 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 SLAQ13239 276 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 MMDQ15546 238 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 MINOS1Q5TGZ0 78 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 RUSC1-AS1Q66K80 236 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 CYB5R2Q6BCY4 276 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 HIST2H2BDQ6DRA6 164 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 C11orf71Q6IPW1 123 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 CCDC144NLQ6NUI1 221 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 RBPMS2Q6ZRY4 209 aaKnown RBP3.88□□□□□ -1.79
SF3B6-202ENST00000478050 Q86TA4 180 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 BPIFA4PQ86YQ2 179 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 TMEM75Q8N9X5 138 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 OR4F17Q8NGA8 305 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 C18orf32Q8TCD1 76 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 VN1R17PQ8TDU5 208 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 BORCS7Q96B45 105 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 ZNF48Q96MX3 618 aaPredicted RBP3.88□□□□□ -1.79
SF3B6-202ENST00000478050 MIEN1Q9BRT3 115 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 SHANK2-AS3Q9BTD1 123 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 PRSS22Q9GZN4 317 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 RPH3ALQ9UNE2 315 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 MINOS1-NBL1R4GNA1 71 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 ARHGAP32A7KAX9 2087 aa3.88□□□□□ -1.79
SF3B6-202ENST00000478050 SERTM2A0A1B0GWG4 89 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 WI2-2373I1.2A0A1W2PRP0 233 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 HSBP1O75506 76 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 IGKV1-17P01599 117 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 HLA-DRB1P01911 266 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 SNRPCP09234 159 aaKnown RBP3.87□□□□□ -1.79
SF3B6-202ENST00000478050 S100A7P31151 101 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 CDKN1AP38936 164 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 MFAP4P55083 255 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 NUTF2P61970 127 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms