RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 HIST1H1EP10412 219 aaKnown RBP16.31■□□□□ 0.2
TRAF4-211ENST00000478021 C12orf74Q32Q52 190 aa16.31■□□□□ 0.2
TRAF4-211ENST00000478021 FFAR4Q5NUL3 377 aa16.31■□□□□ 0.2
TRAF4-211ENST00000478021 OR10J6PQ8NGY7 276 aa16.31■□□□□ 0.2
TRAF4-211ENST00000478021 C2CD4CQ8TF44 421 aa16.31■□□□□ 0.2
TRAF4-211ENST00000478021 FAM167A-AS1Q96KT0 104 aa16.31■□□□□ 0.2
TRAF4-211ENST00000478021 PARD6GQ9BYG4 376 aaPredicted RBP16.31■□□□□ 0.2
TRAF4-211ENST00000478021 LOC102723971A0A1B0GUV8 181 aa16.3■□□□□ 0.2
TRAF4-211ENST00000478021 TMEM189A5PLL7 270 aa16.3■□□□□ 0.2
TRAF4-211ENST00000478021 C11orf94C9JXX5 98 aa16.3■□□□□ 0.2
TRAF4-211ENST00000478021 NDUFB4O95168 129 aa16.3■□□□□ 0.2
TRAF4-211ENST00000478021 PRM2P04554 102 aa16.3■□□□□ 0.2
TRAF4-211ENST00000478021 RRN3P1Q2M238 152 aa16.3■□□□□ 0.2
TRAF4-211ENST00000478021 RGS21Q2M5E4 152 aa16.3■□□□□ 0.2
TRAF4-211ENST00000478021 TIMM9Q9Y5J7 89 aa16.3■□□□□ 0.2
TRAF4-211ENST00000478021 EPPK1P58107 5090 aaKnown RBP16.29■□□□□ 0.2
TRAF4-211ENST00000478021 ZNF705GA8MUZ8 300 aaPredicted RBP16.29■□□□□ 0.2
TRAF4-211ENST00000478021 ZNF253O75346 499 aa16.29■□□□□ 0.2
TRAF4-211ENST00000478021 MRPL32Q9BYC8 188 aaKnown RBP16.29■□□□□ 0.2
TRAF4-211ENST00000478021 FUT9Q9Y231 359 aa16.29■□□□□ 0.2
TRAF4-211ENST00000478021 TRAV10A0A0B4J240 114 aa16.28■□□□□ 0.2
TRAF4-211ENST00000478021 IGLL5B9A064 214 aa16.28■□□□□ 0.2
TRAF4-211ENST00000478021 M0R3E3 92 aa16.28■□□□□ 0.2
TRAF4-211ENST00000478021 OR10J4P0C629 311 aa16.28■□□□□ 0.2
TRAF4-211ENST00000478021 Q5BKY6 102 aa16.28■□□□□ 0.2
TRAF4-211ENST00000478021 EXOC3-AS1Q8N2X6 119 aa16.28■□□□□ 0.2
TRAF4-211ENST00000478021 RPP25LQ8N5L8 163 aaKnown RBP16.28■□□□□ 0.2
TRAF4-211ENST00000478021 OR51M1Q9H341 326 aa16.28■□□□□ 0.2
TRAF4-211ENST00000478021 YTHDF2Q9Y5A9 579 aaKnown RBP16.28■□□□□ 0.2
TRAF4-211ENST00000478021 SPART-AS1P0CW21 52 aa16.27■□□□□ 0.2
TRAF4-211ENST00000478021 CDKN1BP46527 198 aa16.27■□□□□ 0.2
TRAF4-211ENST00000478021 KIR3DS1Q14943 382 aa16.27■□□□□ 0.2
TRAF4-211ENST00000478021 FAM222AQ5U5X8 452 aa16.27■□□□□ 0.2
TRAF4-211ENST00000478021 OR7C2O60412 319 aa16.26■□□□□ 0.19
TRAF4-211ENST00000478021 EIF3GO75821 320 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRAF4-211ENST00000478021 GIPP09681 153 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-211ENST00000478021 PDE6HQ13956 83 aa16.26■□□□□ 0.19
TRAF4-211ENST00000478021 PAXXQ9BUH6 204 aa16.26■□□□□ 0.19
TRAF4-211ENST00000478021 PLA2G2EQ9NZK7 142 aa16.26■□□□□ 0.19
TRAF4-211ENST00000478021 DKK2Q9UBU2 259 aa16.26■□□□□ 0.19
TRAF4-211ENST00000478021 J3KRW8 73 aa16.25■□□□□ 0.19
TRAF4-211ENST00000478021 NBEAP1P0C6P0 100 aa16.25■□□□□ 0.19
TRAF4-211ENST00000478021 ERCC8Q13216 396 aa16.25■□□□□ 0.19
TRAF4-211ENST00000478021 MRPL53Q96EL3 112 aaKnown RBP16.25■□□□□ 0.19
TRAF4-211ENST00000478021 LINC01587Q99440 93 aa16.25■□□□□ 0.19
TRAF4-211ENST00000478021 DEFB131BA0A096LNP1 70 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 NPIPB6E9PJ23 425 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 CT45A10P0DMU9 189 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 ICAM4Q14773 271 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 OXA1LQ15070 435 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 RNF141Q8WVD5 230 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 FXYD5Q96DB9 178 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 AAMDCQ9H7C9 122 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 PRELID1Q9Y255 219 aa16.24■□□□□ 0.19
TRAF4-211ENST00000478021 HTN1P15515 57 aa16.23■□□□□ 0.19
TRAF4-211ENST00000478021 AZU1P20160 251 aa16.23■□□□□ 0.19
TRAF4-211ENST00000478021 FAM122CQ6P4D5 195 aa16.23■□□□□ 0.19
TRAF4-211ENST00000478021 ZNF503Q96F45 646 aa16.23■□□□□ 0.19
TRAF4-211ENST00000478021 PHYHIPLQ96FC7 376 aa16.23■□□□□ 0.19
TRAF4-211ENST00000478021 AQP10Q96PS8 301 aa16.23■□□□□ 0.19
TRAF4-211ENST00000478021 NIPSNAP3BQ9BS92 247 aa16.23■□□□□ 0.19
TRAF4-211ENST00000478021 IGHV4-4A0A075B6R2 117 aa16.22■□□□□ 0.19
TRAF4-211ENST00000478021 TSPOP30536 169 aa16.22■□□□□ 0.19
TRAF4-211ENST00000478021 TMEM256Q8N2U0 113 aa16.22■□□□□ 0.19
TRAF4-211ENST00000478021 APLNQ9ULZ1 77 aa16.22■□□□□ 0.19
TRAF4-211ENST00000478021 FXYD6-FXYD2A0A087WZ82 144 aa16.21■□□□□ 0.19
TRAF4-211ENST00000478021 TEX48A0A1B0GUV7 120 aa16.21■□□□□ 0.19
TRAF4-211ENST00000478021 RAB2AP61019 212 aa16.21■□□□□ 0.19
TRAF4-211ENST00000478021 UBE2L3P68036 154 aaKnown RBP16.21■□□□□ 0.19
TRAF4-211ENST00000478021 ACOT6Q3I5F7 207 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-211ENST00000478021 KHDC3LQ587J8 217 aa16.21■□□□□ 0.19
TRAF4-211ENST00000478021 GFI1BQ5VTD9 330 aa16.21■□□□□ 0.19
TRAF4-211ENST00000478021 HSD17B11Q8NBQ5 300 aa16.21■□□□□ 0.19
TRAF4-211ENST00000478021 ASB13Q8WXK3 278 aa16.21■□□□□ 0.19
TRAF4-211ENST00000478021 IGKV2-40A0A087WW87 121 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-211ENST00000478021 IGKV2D-40P01614 121 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-211ENST00000478021 LEPP41159 167 aa16.2■□□□□ 0.18
TRAF4-211ENST00000478021 ZNF266Q14584 549 aa16.2■□□□□ 0.18
TRAF4-211ENST00000478021 BIRC6Q9NR09 4857 aa16.19■□□□□ 0.18
TRAF4-211ENST00000478021 M6PRP20645 277 aa16.19■□□□□ 0.18
TRAF4-211ENST00000478021 TCTAP57738 103 aa16.19■□□□□ 0.18
TRAF4-211ENST00000478021 TAS2R45P59539 299 aa16.19■□□□□ 0.18
TRAF4-211ENST00000478021 TAS2R60P59551 318 aa16.19■□□□□ 0.18
TRAF4-211ENST00000478021 LGALS9CQ6DKI2 356 aa16.19■□□□□ 0.18
TRAF4-211ENST00000478021 OR2T35Q8NGX2 323 aa16.19■□□□□ 0.18
TRAF4-211ENST00000478021 ODF3Q96PU9 254 aa16.19■□□□□ 0.18
TRAF4-211ENST00000478021 PLAC8L1A1L4L8 177 aa16.18■□□□□ 0.18
TRAF4-211ENST00000478021 HTN3P15516 51 aa16.18■□□□□ 0.18
TRAF4-211ENST00000478021 DAD1P61803 113 aa16.18■□□□□ 0.18
TRAF4-211ENST00000478021 RANP62826 216 aaKnown RBP16.18■□□□□ 0.18
TRAF4-211ENST00000478021 AGPAT4-IT1Q9H0P7 198 aa16.18■□□□□ 0.18
TRAF4-211ENST00000478021 TRAV12-3A0A0B4J271 114 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 A0A1W2PPV4 95 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 RNF222A6NCQ9 220 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 HMGB3O15347 200 aaKnown RBP16.17■□□□□ 0.18
TRAF4-211ENST00000478021 INO80EQ8NBZ0 244 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-211ENST00000478021 OR10G4Q8NGN3 311 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 OR10G9Q8NGN4 311 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 OR10G7Q8NGN6 311 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 VGLL1Q99990 258 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms