RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 APRG1Q8IVJ8 170 aa12.03□□□□□ -0.48
VHL-203ENST00000477538 MRPL53Q96EL3 112 aaKnown RBP12.03□□□□□ -0.48
VHL-203ENST00000477538 WFDC10AQ9H1F0 79 aa12.03□□□□□ -0.48
VHL-203ENST00000477538 ZNF705FA8MVS1 300 aaPredicted RBP12.02□□□□□ -0.49
VHL-203ENST00000477538 SUMO1P63165 101 aaKnown RBP12.02□□□□□ -0.49
VHL-203ENST00000477538 ZNF124Q15973 351 aa12.02□□□□□ -0.49
VHL-203ENST00000477538 CST9LP1Q5W188 147 aa12.02□□□□□ -0.49
VHL-203ENST00000477538 Q8N1Y9 231 aa12.02□□□□□ -0.49
VHL-203ENST00000477538 RPUSD4Q96CM3 377 aaKnown RBP12.02□□□□□ -0.49
VHL-203ENST00000477538 NKX6-2Q9C056 277 aaPredicted RBP12.02□□□□□ -0.49
VHL-203ENST00000477538 RGS13O14921 159 aa12.01□□□□□ -0.49
VHL-203ENST00000477538 SLC25A5P05141 298 aaKnown RBP12.01□□□□□ -0.49
VHL-203ENST00000477538 PRB4P10163 310 aaPredicted RBP12.01□□□□□ -0.49
VHL-203ENST00000477538 CSN1S1P47710 185 aa12.01□□□□□ -0.49
VHL-203ENST00000477538 ATP5G3P48201 142 aa12.01□□□□□ -0.49
VHL-203ENST00000477538 DEFB1P60022 68 aa12.01□□□□□ -0.49
VHL-203ENST00000477538 PMS2P11Q13670 270 aa12.01□□□□□ -0.49
VHL-203ENST00000477538 C5orf17Q8NAS9 161 aa12.01□□□□□ -0.49
VHL-203ENST00000477538 CMTM2Q8TAZ6 248 aa12.01□□□□□ -0.49
VHL-203ENST00000477538 KNCNA6PVL3 124 aa12□□□□□ -0.49
VHL-203ENST00000477538 PRAC2D3DTV9 90 aa12□□□□□ -0.49
VHL-203ENST00000477538 F6UB75 175 aa12□□□□□ -0.49
VHL-203ENST00000477538 BCL2P10415 239 aa12□□□□□ -0.49
VHL-203ENST00000477538 HAGHQ16775 308 aa12□□□□□ -0.49
VHL-203ENST00000477538 CLLU1Q5K131 121 aa12□□□□□ -0.49
VHL-203ENST00000477538 FOXI2Q6ZQN5 318 aa12□□□□□ -0.49
VHL-203ENST00000477538 DEFB125Q8N687 156 aa12□□□□□ -0.49
VHL-203ENST00000477538 RXFP4Q8TDU9 374 aa12□□□□□ -0.49
VHL-203ENST00000477538 SAV1Q9H4B6 383 aaPredicted RBP12□□□□□ -0.49
VHL-203ENST00000477538 RPH3ALQ9UNE2 315 aa12□□□□□ -0.49
VHL-203ENST00000477538 C11orf94C9JXX5 98 aa11.99□□□□□ -0.49
VHL-203ENST00000477538 PRB2P02812 416 aaPredicted RBP11.99□□□□□ -0.49
VHL-203ENST00000477538 GNG5P63218 68 aa11.99□□□□□ -0.49
VHL-203ENST00000477538 ACTL10Q5JWF8 245 aa11.99□□□□□ -0.49
VHL-203ENST00000477538 GDF5OSQ5U4N7 250 aa11.99□□□□□ -0.49
VHL-203ENST00000477538 EBLN2Q6P2I7 272 aa11.99□□□□□ -0.49
VHL-203ENST00000477538 AURKAIP1Q9NWT8 199 aaPredicted RBP11.99□□□□□ -0.49
VHL-203ENST00000477538 A0A0J9YX75 114 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 LOC102723971A0A1B0GUV8 181 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 DIRC3C9JPN6 131 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 ZNF705DP0CH99 300 aaPredicted RBP11.98□□□□□ -0.49
VHL-203ENST00000477538 ZNF705BP0CI00 300 aaPredicted RBP11.98□□□□□ -0.49
VHL-203ENST00000477538 TAGLN2P37802 199 aaKnown RBP11.98□□□□□ -0.49
VHL-203ENST00000477538 CCDC28AQ8IWP9 274 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 OR8A1Q8NGG7 326 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 CITED4Q96RK1 184 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 SRD5A3Q9H8P0 318 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 VAX2Q9UIW0 290 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 EPDR1Q9UM22 224 aa11.98□□□□□ -0.49
VHL-203ENST00000477538 IGKV2-40A0A087WW87 121 aaPredicted RBP11.97□□□□□ -0.49
VHL-203ENST00000477538 RBFOX3A6NFN3 312 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 IGKV2D-40P01614 121 aaPredicted RBP11.97□□□□□ -0.49
VHL-203ENST00000477538 HLA-DRB4P13762 266 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
VHL-203ENST00000477538 HIST1H1AQ02539 215 aaPredicted RBP11.97□□□□□ -0.49
VHL-203ENST00000477538 TOR2AQ5JU69 321 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 STHQ8IWL8 128 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 OR10J6PQ8NGY7 276 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 FAM210AQ96ND0 272 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 TXNDC17Q9BRA2 123 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 TCEAL7Q9BRU2 100 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 HLA-DRB4X5D2U9 266 aa11.97□□□□□ -0.49
VHL-203ENST00000477538 H3BMM0 161 aa11.96□□□□□ -0.49
VHL-203ENST00000477538 PEX7O00628 323 aa11.96□□□□□ -0.49
VHL-203ENST00000477538 DUSP14O95147 198 aaKnown RBP11.96□□□□□ -0.49
VHL-203ENST00000477538 TCRAP04437 139 aa11.96□□□□□ -0.49
VHL-203ENST00000477538 ZNF506Q5JVG8 444 aa11.96□□□□□ -0.49
VHL-203ENST00000477538 GOLT1AQ6ZVE7 132 aa11.96□□□□□ -0.49
VHL-203ENST00000477538 RARRES2Q99969 163 aa11.96□□□□□ -0.49
VHL-203ENST00000477538 ATG101Q9BSB4 218 aa11.96□□□□□ -0.49
VHL-203ENST00000477538 SERTM2A0A1B0GWG4 89 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 RBAKDNA6NC62 111 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 F6UZH7 168 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 IGHV4-30-4P0DP06 118 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 CNN1P51911 297 aaKnown RBP11.95□□□□□ -0.5
VHL-203ENST00000477538 CYB561D1Q8N8Q1 229 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 OR4B1Q8NGF8 309 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 EIF5A2Q9GZV4 153 aaKnown RBP11.95□□□□□ -0.5
VHL-203ENST00000477538 TUBA4BQ9H853 241 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 DNAH3Q8TD57 4116 aa11.95□□□□□ -0.5
VHL-203ENST00000477538 SCO2A0A1W2PP80 73 aa11.94□□□□□ -0.5
VHL-203ENST00000477538 NPIPB6E9PJ23 425 aa11.94□□□□□ -0.5
VHL-203ENST00000477538 K7EIL1 84 aa11.94□□□□□ -0.5
VHL-203ENST00000477538 K7EQM0 130 aa11.94□□□□□ -0.5
VHL-203ENST00000477538 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
VHL-203ENST00000477538 ERCC8Q13216 396 aa11.94□□□□□ -0.5
VHL-203ENST00000477538 TRPT1Q86TN4 253 aaKnown RBP11.94□□□□□ -0.5
VHL-203ENST00000477538 VGLL1Q99990 258 aa11.94□□□□□ -0.5
VHL-203ENST00000477538 A8MTW9 85 aa11.93□□□□□ -0.5
VHL-203ENST00000477538 PDE6DO43924 150 aa11.93□□□□□ -0.5
VHL-203ENST00000477538 RPL35AP18077 110 aaKnown RBP11.93□□□□□ -0.5
VHL-203ENST00000477538 TMEM78Q5T7P6 136 aa11.93□□□□□ -0.5
VHL-203ENST00000477538 C9orf47Q6ZRZ4 202 aa11.93□□□□□ -0.5
VHL-203ENST00000477538 AGPAT4-IT1Q9H0P7 198 aa11.93□□□□□ -0.5
VHL-203ENST00000477538 TRAV8-1A0A0A6YYK1 113 aa11.92□□□□□ -0.5
VHL-203ENST00000477538 RBMY1BA6NDE4 496 aaKnown RBP11.92□□□□□ -0.5
VHL-203ENST00000477538 RBMY1EA6NEQ0 496 aaKnown RBP11.92□□□□□ -0.5
VHL-203ENST00000477538 A8MZ25 164 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms