RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	NCAPD3	P42695	1498 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	MYOM2	P54296	1465 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	CEP162	Q5TB80	1403 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	TRAV13-1	A0A0B4J241	112 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	TRBV27	A0A0K0K1C4	114 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447		A0A1B0GW54	56 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	C7orf71	A4D174	169 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	MEIS3P1	A6NDR6	274 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447		H3BMG7	143 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447		I3L521	148 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447		J3QR89	54 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	TCRA	P04437	139 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	PRM2	P04554	102 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	CCL5	P13501	91 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST1H1D	P16402	221 aa	Known RBP	0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	HBB	P68871	147 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	CATR1	Q13166	79 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	HSD17B12	Q53GQ0	312 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	AADACL3	Q5VUY0	350 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	RPL22L1	Q6P5R6	122 aa	Known RBP	0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	C22orf39	Q6P5X5	142 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	LYZL1	Q6UWQ5	148 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	SSX8	Q7RTT4	187 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	AAED1	Q7RTV5	226 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	LINC00305	Q7Z4B0	112 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	TEN1	Q86WV5	123 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447		Q8N2B8	174 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	C10orf111	Q8N326	155 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	MORN4	Q8NDC4	146 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	WFDC5	Q8TCV5	224 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	BRK1	Q8WUW1	75 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	LCN9	Q8WX39	176 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447		Q96M85	177 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	AP1S3	Q96PC3	154 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	BANF2	Q9H503	90 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	IL36B	Q9NZH7	164 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	CCDC167	Q9P0B6	97 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	CKLF	Q9UBR5	152 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	FUT9	Q9Y231	359 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447		V9GYS6	101 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	NALCN	Q8IZF0	1738 aa		0.92	□□□□□ -2.26
TARDBP-208	ENST00000477447	CPSF1	Q10570	1443 aa	Known RBP	0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	NAIP	Q13075	1403 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	MAP3K1	Q13233	1512 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	KDM5D	Q9BY66	1539 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447		A0A087X0T9	212 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447		A0A0G2JMM0	328 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447		A0A1W2PPB8	328 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	OR2T8	A6NH00	312 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	BBIP1	A8MTZ0	92 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	KIR3DP1	A8MWS1	328 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447		A8MWV9	139 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	UQCRQ	O14949	82 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	CREBL2	O60519	120 aa	Predicted RBP	0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	CST7	O76096	145 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	SLC25A5	P05141	298 aa	Known RBP	0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	CD2	P06729	351 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	CTSD	P07339	412 aa	Predicted RBP	0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	CD14	P08571	375 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	FABP2	P12104	132 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	GUCA1A	P43080	201 aa	Predicted RBP	0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	DYNLT3	P51808	116 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	KRTAP10-4	P60372	401 aa	Predicted RBP	0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	S100A10	P60903	97 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	UBE2B	P63146	152 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	MYL5	Q02045	173 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	KISS1	Q15726	138 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447		Q6AWC8	147 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	IZUMO2	Q6UXV1	221 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	PATE2	Q6UY27	113 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	TMEM91	Q6ZNR0	172 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	ATOH7	Q8N100	152 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	TTC9C	Q8N5M4	171 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	TEX29	Q8N6K0	151 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	C3orf56	Q8N813	242 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	WFDC11	Q8NEX6	87 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	OR8D4	Q8NGM9	314 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	C10orf105	Q8TEF2	133 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	DIRC1	Q969H9	104 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	TAS2R8	Q9NYW2	309 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	COMMD3	Q9UBI1	195 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	DNAJC15	Q9Y5T4	150 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	LINC00312	Q9Y6C7	94 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	CCDC18	Q5T9S5	1454 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	FRMPD1	Q5SYB0	1578 aa		0.91	□□□□□ -2.26
TARDBP-208	ENST00000477447	NSD3	Q9BZ95	1437 aa		0.9	□□□□□ -2.26
TARDBP-208	ENST00000477447	TOPBP1	Q92547	1522 aa		0.9	□□□□□ -2.26
TARDBP-208	ENST00000477447	CCDC88C	Q9P219	2028 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	TRBV20-1	A0A075B6N2	111 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	TRAV12-2	A0A075B6T6	113 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	IGHV1-18	A0A0C4DH31	117 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447		A0A0J9YW62	118 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	TRBV6-5	A0A0K0K1A5	114 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	SMIM31	A0A1B0GVY4	71 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	LOC107986453	A0A1B0GWG9	222 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	OR51F1	A6NGY5	319 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	HMSD	A8MTL9	139 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447	C1orf196	B1AJZ1	125 aa		0.9	□□□□□ -2.27
TARDBP-208	ENST00000477447		H3BT86	120 aa		0.9	□□□□□ -2.27

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