RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 J3KRW8 73 aa8.17□□□□□ -1.1
VARS2-208ENST00000477052 MRPS12O15235 138 aaKnown RBP8.17□□□□□ -1.1
VARS2-208ENST00000477052 SIX6O95475 246 aa8.17□□□□□ -1.1
VARS2-208ENST00000477052 DLK1P80370 383 aa8.17□□□□□ -1.1
VARS2-208ENST00000477052 CYCSP99999 105 aaKnown RBP8.17□□□□□ -1.1
VARS2-208ENST00000477052 RAB32Q13637 225 aa8.17□□□□□ -1.1
VARS2-208ENST00000477052 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
VARS2-208ENST00000477052 NMES1Q9C002 83 aa8.17□□□□□ -1.1
VARS2-208ENST00000477052 ARV1Q9H2C2 271 aa8.17□□□□□ -1.1
VARS2-208ENST00000477052 NOP10Q9NPE3 64 aaKnown RBP8.17□□□□□ -1.1
VARS2-208ENST00000477052 MGAT4CQ9UBM8 478 aa8.17□□□□□ -1.1
VARS2-208ENST00000477052 LSM5Q9Y4Y9 91 aaKnown RBP8.17□□□□□ -1.1
VARS2-208ENST00000477052 A0A087X0K7 114 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 L7N2F9 121 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 SLC17A3O00476 420 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 IFNA7P01567 189 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 PVALBP20472 110 aaPredicted RBP8.16□□□□□ -1.1
VARS2-208ENST00000477052 H2BFSP57053 126 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 PLP1P60201 277 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 S100A10P60903 97 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 VAMP2P63027 116 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 SMUG1Q53HV7 270 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 SOHLH1Q5JUK2 328 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 SLC51BQ86UW2 128 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 C15orf53Q8NAA6 179 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 OR10P1Q8NGE3 313 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 ZNRF2Q8NHG8 242 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 RNF141Q8WVD5 230 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 ARPC5LQ9BPX5 153 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 NPVFQ9HCQ7 196 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 LINC00588Q9Y4M8 146 aa8.16□□□□□ -1.1
VARS2-208ENST00000477052 TRAV5A0A0B4J249 113 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 NBDYA0A0U1RRE5 68 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 CBY3A6NI87 242 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 AGPAT2O15120 278 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 ATP5G1P05496 136 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 TSPOP30536 169 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 S100A7P31151 101 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 ATP5G3P48201 142 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 TAS2R60P59551 318 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 SELENOTP62341 195 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 TEPPQ6URK8 271 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 LINC00305Q7Z4B0 112 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 MGST2Q99735 147 aa8.15□□□□□ -1.1
VARS2-208ENST00000477052 ZNF331Q9NQX6 463 aaPredicted RBP8.15□□□□□ -1.1
VARS2-208ENST00000477052 A0A0J9YY99 117 aa8.14□□□□□ -1.11
VARS2-208ENST00000477052 LINC00862A6NCI5 91 aa8.14□□□□□ -1.11
VARS2-208ENST00000477052 FNDC10F2Z333 226 aa8.14□□□□□ -1.11
VARS2-208ENST00000477052 H3BQ15 152 aa8.14□□□□□ -1.11
VARS2-208ENST00000477052 OR5I1Q13606 314 aa8.14□□□□□ -1.11
VARS2-208ENST00000477052 OPCMLQ14982 345 aa8.14□□□□□ -1.11
VARS2-208ENST00000477052 TMEM37Q8WXS4 190 aa8.14□□□□□ -1.11
VARS2-208ENST00000477052 MED28Q9H204 178 aa8.14□□□□□ -1.11
VARS2-208ENST00000477052 LYRM2Q9NU23 88 aaPredicted RBP8.14□□□□□ -1.11
VARS2-208ENST00000477052 TIMM8BQ9Y5J9 83 aaPredicted RBP8.14□□□□□ -1.11
VARS2-208ENST00000477052 LOC105371267A0A1B0GV96 52 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 GAGE12BA1L429 117 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 COX7A2P2O60397 106 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 GAGE7O76087 117 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 RLN2P04090 185 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 GAGE12FP0CL80 117 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 GAGE12GP0CL81 117 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 GAGE12IP0CL82 117 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 CDKN1BP46527 198 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 CAV2P51636 162 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 B2MP61769 119 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 GFI1BQ5VTD9 330 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 FAM122CQ6P4D5 195 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 SSX7Q7RTT5 188 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 RNASE8Q8TDE3 154 aaKnown RBP8.13□□□□□ -1.11
VARS2-208ENST00000477052 PPP1R1CQ8WVI7 109 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 C16orf74Q96GX8 76 aa8.13□□□□□ -1.11
VARS2-208ENST00000477052 HSPG2P98160 4391 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 TRAV26-1A0A087WT03 109 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 TRAV12-3A0A0B4J271 114 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 FAM24AA6NFZ4 105 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 E5RGE8 158 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 H0YIZ8 118 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 CST7O76096 145 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 PET100P0DJ07 73 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 HOXA5P20719 270 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 CLINT1Q14677 625 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 LRRC37A5PQ49AS3 106 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 C10orf113Q5VZT2 155 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 MIC13Q5XKP0 118 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 ZNF546Q86UE3 836 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 TMEM256Q8N2U0 113 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 C6orf223Q8N319 242 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 TMEM252Q8N6L7 170 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 GGACTQ9BVM4 153 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 KRTAP1-5Q9BYS1 174 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 HSPB11Q9Y547 144 aa8.12□□□□□ -1.11
VARS2-208ENST00000477052 IGSF23A1L1A6 192 aa8.11□□□□□ -1.11
VARS2-208ENST00000477052 H7BYZ3 331 aa8.11□□□□□ -1.11
VARS2-208ENST00000477052 MPC2O95563 127 aa8.11□□□□□ -1.11
VARS2-208ENST00000477052 IGLC2P0DOY2 106 aa8.11□□□□□ -1.11
VARS2-208ENST00000477052 SULT1A1P50225 295 aa8.11□□□□□ -1.11
VARS2-208ENST00000477052 CCL18P55774 89 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms