RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 FOXA2Q9Y261 457 aaPredicted RBP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 TENM2Q9NT68 2774 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 TRBV20OR9-2A0A075B6H5 130 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 TRAV5A0A0B4J249 113 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 TEX50A0A1B0GTY4 177 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 GRIFINA4D1Z8 144 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 SRRM4A7MD48 611 aaKnown RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 K7EN84 100 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 CCL24O00175 119 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 PRYO14603 147 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 SPINK4O60575 86 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 NDUFA3O95167 84 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 MT-CO2P00403 227 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 GCGP01275 180 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 FRMD6-AS1P0C7T7 363 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 CT45A6P0DMU7 189 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 CT45A5P0DMU8 189 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 CT45A7P0DMV0 189 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 CBLN1P23435 193 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 CD24P25063 80 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 CRYBB3P26998 211 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 PSMB8P28062 276 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 RPL29P47914 159 aaKnown RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 REG1BP48304 166 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 TCL1AP56279 114 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 USF2Q15853 346 aaPredicted RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 AARDQ4LEZ3 155 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 COA6Q5JTJ3 125 aaKnown RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF600Q6ZNG1 722 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF833PQ6ZTB9 187 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 TMEM144Q7Z5S9 345 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF329Q86UD4 541 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF664Q8N3J9 261 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 GBGT1Q8N5D6 347 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 CMTM2Q8TAZ6 248 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 RNASEH2CQ8TDP1 164 aaKnown RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 SFRP2Q96HF1 295 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 ADTRPQ96IZ2 230 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 UBE2E2Q96LR5 201 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 NOL4LQ96MY1 436 aaPredicted RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 UHRF2Q96PU4 802 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 RNF5Q99942 180 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 NABP2Q9BQ15 211 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 MRPL20Q9BYC9 149 aaKnown RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 TMEM14BQ9NUH8 114 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 IL36BQ9NZH7 164 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 PRNDQ9UKY0 176 aa3.25□□□□□ -1.89
VPS13D-206ENST00000476045 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
VPS13D-206ENST00000476045 WI2-2373I1.2A0A1W2PRP0 233 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 F2Z2F3 143 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 H3BUA1 57 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 OR7C2O60412 319 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 IGHV3-48P01763 117 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 APOA2P02652 100 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 PRB2P02812 416 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-206ENST00000476045 LGALS1P09382 135 aaKnown RBP3.24□□□□□ -1.89
VPS13D-206ENST00000476045 OR10J4P0C629 311 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 SAA1P0DJI8 122 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-206ENST00000476045 RNASE2P10153 161 aaKnown RBP3.24□□□□□ -1.89
VPS13D-206ENST00000476045 MGST1P10620 155 aaKnown RBP3.24□□□□□ -1.89
VPS13D-206ENST00000476045 MC5RP33032 325 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 ERVFC1-1P60608 527 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 PRCDQ00LT1 54 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 FXYD3Q14802 87 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 TWIST1Q15672 202 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 RTL8BQ17RB0 113 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 C5orf64Q2M2E5 130 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 RPEL1Q2QD12 228 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 KIAA1644Q3SXP7 199 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 CENPWQ5EE01 88 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 C10orf55Q5SWW7 151 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 ASPHD1Q5U4P2 390 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 PQLC2Q6ZP29 291 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 BAGE3Q86Y29 109 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 BAGE2Q86Y30 109 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 PDPNQ86YL7 162 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 OR8I2Q8N0Y5 310 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 NPBQ8NG41 125 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 OR10W1Q8NGF6 305 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 C11orf52Q96A22 123 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 BTF3L4Q96K17 158 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 SLC35E1Q96K37 410 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 MS4A10Q96PG2 267 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 TXNDC17Q9BRA2 123 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 TECRQ9NZ01 308 aaKnown RBP3.24□□□□□ -1.89
VPS13D-206ENST00000476045 NAGKQ9UJ70 344 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF256Q9Y2P7 627 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-206ENST00000476045 WASHC3Q9Y3C0 194 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 LSM4Q9Y4Z0 139 aaKnown RBP3.24□□□□□ -1.89
VPS13D-206ENST00000476045 RYR3Q15413 4870 aa3.24□□□□□ -1.89
VPS13D-206ENST00000476045 IGHV3-21A0A0B4J1V1 117 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 IGHV3-72A0A0B4J1Y9 119 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 TRAV41A0A0B4J266 112 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 HELTA6NFD8 242 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 A8MWP6 167 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 SNURFLB1AK76 121 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 C3orf84H3BNL1 204 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 FCN1O00602 326 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 ATP6V0E1O15342 81 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms