RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 PRR25Q96S07 402 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 ALKBH7Q9BT30 221 aaPredicted RBP7.54□□□□□ -1.2
USP39-214ENST00000474572 CLEC5AQ9NY25 188 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 LINC00527Q9UJ94 153 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 ABCA1O95477 2261 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 TRAV8-2A0A0B4J237 113 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 IGHV3-35A0A0C4DH35 117 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 TMEM89A2RUT3 159 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 CT45A10P0DMU9 189 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 HLA-DMBP28068 263 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 KRTAP10-9P60411 292 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 BLCAPP62952 87 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 DEFB112Q30KQ8 113 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 C9orf152Q5JTZ5 239 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 LCN12Q6JVE5 192 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 Q6ZS46 218 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 KCNS1Q96KK3 526 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 PGLYRP4Q96LB8 373 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 PPP1R14DQ9NXH3 145 aa7.53□□□□□ -1.2
USP39-214ENST00000474572 IGHV3OR16-8A0A075B7F1 116 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 A0A0G2JLM5 398 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 A0A1B0GW15 77 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 LINC00587B1AMM8 73 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 SH2D1AO60880 128 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 FAM209BQ5JX69 171 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 DMRTA1Q5VZB9 504 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 PRSS57Q6UWY2 283 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 BAGE3Q86Y29 109 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 RCHY1Q96PM5 261 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 ACACBO00763 2458 aa7.52□□□□□ -1.21
USP39-214ENST00000474572 MED13LQ71F56 2210 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 TACC2O95359 2948 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 A0A1B0GUT8 65 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 A0A1W2PS18 150 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 TGFAP01135 160 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 TRBV12-3P01733 135 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 IGHV4-59P01825 116 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 GPX1P07203 203 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 BMI1P35226 326 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 RPS20P60866 119 aaKnown RBP7.51□□□□□ -1.21
USP39-214ENST00000474572 PKIAP61925 76 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 CTAG1AP78358 180 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 RIGQ13278 110 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 IQCJQ1A5X6 159 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 ZNF493Q6ZR52 646 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 Q6ZWC4 215 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 ASCL2Q99929 193 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 VGLL1Q99990 258 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 KLK15Q9H2R5 256 aa7.51□□□□□ -1.21
USP39-214ENST00000474572 PRRC2AP48634 2157 aaKnown RBP7.51□□□□□ -1.21
USP39-214ENST00000474572 UBR5O95071 2799 aaPredicted RBP7.51□□□□□ -1.21
USP39-214ENST00000474572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.51□□□□□ -1.218e-11■■■■■ 27.5
USP39-214ENST00000474572 USP9XQ93008 2570 aaPredicted RBP7.51□□□□□ -1.21
USP39-214ENST00000474572 CACNA1BQ00975 2339 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 TMEM189A5PLL7 270 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 ZNF705FA8MVS1 300 aaPredicted RBP7.5□□□□□ -1.21
USP39-214ENST00000474572 PRAC2D3DTV9 90 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 SOCS3O14543 225 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 ZNF324O75467 553 aaPredicted RBP7.5□□□□□ -1.21
USP39-214ENST00000474572 ARMS2P0C7Q2 107 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 PF4V1P10720 104 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 PSMB8P28062 276 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 CTRLP40313 264 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 CAMPP49913 170 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 ZNF80P51504 273 aaPredicted RBP7.5□□□□□ -1.21
USP39-214ENST00000474572 FAM162BQ5T6X4 162 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 IGFL4Q6B9Z1 124 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 UNQ9165/PRO28630Q6UXU0 137 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 Q6YL49 198 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 ZNF575Q86XF7 245 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 GPHB5Q86YW7 130 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 OR4X2Q8NGF9 303 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 Q8TAT8 98 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 URB1-AS1Q96HZ7 61 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 NDFIP1Q9BT67 221 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 SSBP4Q9BWG4 385 aaPredicted RBP7.5□□□□□ -1.21
USP39-214ENST00000474572 LENEPQ9Y5L5 61 aa7.5□□□□□ -1.21
USP39-214ENST00000474572 AKAP6Q13023 2319 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 LOC102724200A0A096LPH7 203 aaPredicted RBP7.49□□□□□ -1.21
USP39-214ENST00000474572 IGHV3-66A0A0C4DH42 116 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 K7EMT4 169 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 SMAD7O15105 426 aaKnown RBP7.49□□□□□ -1.21
USP39-214ENST00000474572 ZNF207O43670 478 aaKnown RBP7.49□□□□□ -1.21
USP39-214ENST00000474572 LINC01559Q495D7 138 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 Q5PR19 223 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 CYB5R2Q6BCY4 276 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 C9orf47Q6ZRZ4 202 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 NIT1Q86X76 327 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 MYOZ3Q8TDC0 251 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 NPFFR1Q9GZQ6 430 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 NAGKQ9UJ70 344 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 VPREB3Q9UKI3 123 aa7.49□□□□□ -1.21
USP39-214ENST00000474572 KIR2DL5BA0A0G2JN68 375 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 KIR2DL5BA0A0G2JPC4 375 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 AMTP48728 403 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 TEX43Q6ZNM6 134 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms