RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TRGC1P0CF51 173 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 S100A7P31151 101 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 TM4SF20Q53R12 229 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 C1orf194Q5T5A4 169 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 GLMPQ8WWB7 406 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 TMEM190Q8WZ59 177 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 PSG8Q9UQ74 426 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 CHEK1O14757 476 aa13.75□□□□□ -0.21
VARS2-206ENST00000473916 C16orf54Q6UWD8 224 aa13.75□□□□□ -0.21
VARS2-206ENST00000473916 FAM231DQ6ZW35 169 aa13.75□□□□□ -0.21
VARS2-206ENST00000473916 TMEM183AQ8IXX5 376 aa13.75□□□□□ -0.21
VARS2-206ENST00000473916 BIN3Q9NQY0 253 aa13.75□□□□□ -0.21
VARS2-206ENST00000473916 PRAC2D3DTV9 90 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 ZC2HC1AQ96GY0 325 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 C8orf49Q96NF6 230 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 VGLL1Q99990 258 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 TRAV8-2A0A0B4J237 113 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 FAM181BA6NEQ2 426 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 C5orf52A6NGY3 159 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 GATCO43716 136 aaKnown RBP13.74□□□□□ -0.21
VARS2-206ENST00000473916 ZNF253O75346 499 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 S100A6P06703 90 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 Q8N2B8 174 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 Q8TAT8 98 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 SMIM12Q96EX1 92 aa13.74□□□□□ -0.21
VARS2-206ENST00000473916 SMIM27A0A1W2PRY6 76 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 CSN1S1P47710 185 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 FAM209BQ5JX69 171 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 C18orf65Q6ZTR6 163 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 C19orf71A6NCJ1 209 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 FABP9Q0Z7S8 132 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 FOXE3Q13461 319 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 LCN12Q6JVE5 192 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 GPHB5Q86YW7 130 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 MYOZ3Q8TDC0 251 aa13.73□□□□□ -0.21
VARS2-206ENST00000473916 TRBV6-1A0A0K0K1D8 114 aa13.72□□□□□ -0.21
VARS2-206ENST00000473916 TMEM89A2RUT3 159 aa13.72□□□□□ -0.21
VARS2-206ENST00000473916 K7EQM0 130 aa13.72□□□□□ -0.21
VARS2-206ENST00000473916 CBLN1P23435 193 aa13.72□□□□□ -0.21
VARS2-206ENST00000473916 NDUFA6P56556 154 aa13.72□□□□□ -0.21
VARS2-206ENST00000473916 ERCC8Q13216 396 aa13.71□□□□□ -0.21
VARS2-206ENST00000473916 ELANEP08246 267 aa13.71□□□□□ -0.22
VARS2-206ENST00000473916 CRIP1P50238 77 aa13.71□□□□□ -0.22
VARS2-206ENST00000473916 Q6ZSV7 163 aa13.71□□□□□ -0.22
VARS2-206ENST00000473916 GRAMD2BQ96HH9 432 aa13.71□□□□□ -0.22
VARS2-206ENST00000473916 BTF3L4Q96K17 158 aa13.71□□□□□ -0.22
VARS2-206ENST00000473916 ZNF492Q9P255 531 aa13.71□□□□□ -0.22
VARS2-206ENST00000473916 MRPL54Q6P161 138 aaKnown RBP13.7□□□□□ -0.22
VARS2-206ENST00000473916 GBGT1Q8N5D6 347 aa13.7□□□□□ -0.22
VARS2-206ENST00000473916 TMEM86BQ8N661 226 aa13.7□□□□□ -0.22
VARS2-206ENST00000473916 TEX29Q8N6K0 151 aa13.7□□□□□ -0.22
VARS2-206ENST00000473916 GPR61Q9BZJ8 451 aa13.7□□□□□ -0.22
VARS2-206ENST00000473916 RPP21Q9H633 154 aaKnown RBP13.7□□□□□ -0.22
VARS2-206ENST00000473916 DAZ1Q9NQZ3 744 aaKnown RBP13.7□□□□□ -0.22
VARS2-206ENST00000473916 IGKV3-7A0A075B6H7 116 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 IGHV4OR15-8A0A075B7B6 117 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 A0A087WW49 117 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 IGHV7-4-1A0A0J9YVY3 117 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 P01737 135 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 TCF24Q7RTU0 167 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 KLHDC1Q8N7A1 406 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 C20orf173Q96LM9 149 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 NEU1Q99519 415 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 SLC50A1Q9BRV3 221 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 RHPN1-AS1Q9BWJ2 59 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 ZFP30Q9Y2G7 519 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 TRAPPC1Q9Y5R8 145 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 LGALS1P09382 135 aaKnown RBP13.69□□□□□ -0.22
VARS2-206ENST00000473916 GZMBP10144 247 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 RPL19P84098 196 aaKnown RBP13.69□□□□□ -0.22
VARS2-206ENST00000473916 DEFB136Q30KP8 78 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 TCTEX1D4Q5JR98 221 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 GFI1BQ5VTD9 330 aa13.69□□□□□ -0.22
VARS2-206ENST00000473916 TRAV9-1A0A075B6T8 112 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 UBE2CO00762 179 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 SRD5A1P18405 259 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 RNF152Q8N8N0 203 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 NUP35Q8NFH5 326 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 TSKUQ8WUA8 353 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 SETD2Q9BYW2 2564 aaPredicted RBP13.68□□□□□ -0.22
VARS2-206ENST00000473916 AKR1D1P51857 326 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 PRR31Q5SQ13 230 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 GTSF1Q8WW33 167 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 DAZAP1Q96EP5 407 aaKnown RBP13.68□□□□□ -0.22
VARS2-206ENST00000473916 C16orf92Q96LL3 132 aa13.68□□□□□ -0.22
VARS2-206ENST00000473916 IZUMO1RA6ND01 250 aa13.67□□□□□ -0.22
VARS2-206ENST00000473916 HIGD1CA8MV81 97 aa13.67□□□□□ -0.22
VARS2-206ENST00000473916 NPIPB6E9PJ23 425 aa13.67□□□□□ -0.22
VARS2-206ENST00000473916 DEFB1P60022 68 aa13.67□□□□□ -0.22
VARS2-206ENST00000473916 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
VARS2-206ENST00000473916 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
VARS2-206ENST00000473916 UBE2E2Q96LR5 201 aa13.67□□□□□ -0.22
VARS2-206ENST00000473916 PRR25Q96S07 402 aa13.67□□□□□ -0.22
VARS2-206ENST00000473916 SMPXQ9UHP9 88 aa13.67□□□□□ -0.22
VARS2-206ENST00000473916 SERTM2A0A1B0GWG4 89 aa13.66□□□□□ -0.22
VARS2-206ENST00000473916 SOCS3O14543 225 aa13.66□□□□□ -0.22
VARS2-206ENST00000473916 ZNF705DP0CH99 300 aaPredicted RBP13.66□□□□□ -0.22
VARS2-206ENST00000473916 ZNF705BP0CI00 300 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms