RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 MRPL53Q96EL3 112 aaKnown RBP5.93□□□□□ -1.46
CCDC171-205ENST00000472806 USMG5Q96IX5 58 aa5.93□□□□□ -1.46
CCDC171-205ENST00000472806 ALKBH7Q9BT30 221 aaPredicted RBP5.93□□□□□ -1.46
CCDC171-205ENST00000472806 SPTBN2O15020 2390 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 TRAV40A0A0B4J280 105 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 A0A1B0GUS0 222 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 TMEM189A5PLL7 270 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 SH2D7A6NKC9 451 aaPredicted RBP5.92□□□□□ -1.46
CCDC171-205ENST00000472806 J3QLI3 93 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 IGF1P05019 195 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 KRTDAPP60985 99 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 PMCHL1Q16048 86 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 LINC00322Q6ZN03 302 aaPredicted RBP5.92□□□□□ -1.46
CCDC171-205ENST00000472806 TEX43Q6ZNM6 134 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 Q6ZWC4 215 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 ZNF664Q8N3J9 261 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 GTSF1Q8WW33 167 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 ZC2HC1AQ96GY0 325 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 C17orf77Q96MU5 243 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 NDUFAF3Q9BU61 184 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 VAMP8Q9BV40 100 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 PRO1933Q9H354 126 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 NRN1Q9NPD7 142 aa5.92□□□□□ -1.46
CCDC171-205ENST00000472806 PRRC2CQ9Y520 2896 aaKnown RBP5.91□□□□□ -1.46
CCDC171-205ENST00000472806 LOC102724200A0A096LPH7 203 aaPredicted RBP5.91□□□□□ -1.46
CCDC171-205ENST00000472806 A0A0G2JLM5 398 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 KIR2DL5BA0A0G2JN68 375 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 KIR2DL5BA0A0G2JPC4 375 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 C20orf202A1L168 122 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 M0R2Z0 102 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 BUB3O43684 328 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 TRGV3P03979 118 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 OR5AL1P0C617 328 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 FRMD6-AS1P0C7T7 363 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 COX6B1P14854 86 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 GDF5OSQ5U4N7 250 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 RNASEKQ6P5S7 137 aaKnown RBP5.91□□□□□ -1.46
CCDC171-205ENST00000472806 CLEC19AQ6UXS0 136 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 KIR2DL5AQ8N109 375 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 KLHDC1Q8N7A1 406 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 ASCL2Q99929 193 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 C20orf144Q9BQM9 153 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 ZNF580Q9UK33 172 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 MGAQ8IWI9 3026 aa5.91□□□□□ -1.46
CCDC171-205ENST00000472806 SPTA1P02549 2419 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 PIEZO2Q9H5I5 2752 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 SPENQ96T58 3664 aaKnown RBP5.9□□□□□ -1.46
CCDC171-205ENST00000472806 IGHV4-30-2A0A087WSY4 118 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 A6NDX4 124 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 FABP5P3A8MUU1 101 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 F2Z2F3 143 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 G3V318 75 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 M0R3E3 92 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 NDUFA4O00483 81 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 SH2D1AO60880 128 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 IGHG2P01859 326 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 NTF3P20783 257 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 ARL3P36405 182 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 KRTAP10-2P60368 255 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 C19orf54Q5BKX5 351 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 SAMD13Q5VXD3 122 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 LCN12Q6JVE5 192 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 C9orf139Q6ZV77 190 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 LURAP1LQ8IV03 231 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 LINC01356Q8N9X3 169 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 C14orf144Q96I85 54 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 CCDC140Q96MF4 163 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 PRR25Q96S07 402 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 SMAD5-AS1Q9Y6J3 95 aa5.9□□□□□ -1.46
CCDC171-205ENST00000472806 PLXNB1O43157 2135 aa5.9□□□□□ -1.47
CCDC171-205ENST00000472806 BSNQ9UPA5 3926 aa5.9□□□□□ -1.47
CCDC171-205ENST00000472806 IGKV2-40A0A087WW87 121 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-205ENST00000472806 H3BUX3 64 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 IGKV2D-40P01614 121 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-205ENST00000472806 APOHP02749 345 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-205ENST00000472806 BTF3P20290 206 aaKnown RBP5.89□□□□□ -1.47
CCDC171-205ENST00000472806 HIST1H1AQ02539 215 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-205ENST00000472806 TMEM78Q5T7P6 136 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 BRD3OSQ6XYD6 125 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 ZNF493Q6ZR52 646 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 NIT1Q86X76 327 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 TMEM219Q86XT9 240 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 FER1L6-AS1Q8NA97 138 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 PIFOQ8TCI5 191 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 C8orf49Q96NF6 230 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 RCHY1Q96PM5 261 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 HSPB8Q9UJY1 196 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 LENEPQ9Y5L5 61 aa5.89□□□□□ -1.47
CCDC171-205ENST00000472806 ABCA4P78363 2273 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 IGHV3OR16-10A0A075B7F0 116 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 TMEM89A2RUT3 159 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 M0R143 59 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 LINC00614P0C842 121 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 CRIP1P50238 77 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 ZNF138P52744 262 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 MIEN1Q9BRT3 115 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 TPPP3Q9BW30 176 aa5.88□□□□□ -1.47
CCDC171-205ENST00000472806 PPP1R14DQ9NXH3 145 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms