RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 YTHDC2Q9H6S0 1430 aaKnown RBP0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 KPNA4O00629 521 aaPredicted RBP0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 CD14P08571 375 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 CRYBA4P53673 196 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 MIR22HGQ0VDD5 57 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 DIAPH2-AS1Q14236 149 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 SPATA8Q6RVD6 105 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 FOXI2Q6ZQN5 318 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 MCEEQ96PE7 176 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 OTORQ9NRC9 128 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 SNRNP200O75643 2136 aaKnown RBP0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 HEATR1Q9H583 2144 aaKnown RBP0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 RTL9Q8NET4 1388 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 NUP210LQ5VU65 1888 aa0.8□□□□□ -2.28
PRPF40A-208ENST00000472760 MYLKQ15746 1914 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 PIK3C2AO00443 1686 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 PPP5D1E7EU14 171 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 PPP1R2P3Q6NXS1 205 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 LINC00299Q6ZSB3 139 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 PRR15Q8IV56 129 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 CARD19Q96LW7 228 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 OR4C12Q96R67 309 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 NUBP2Q9Y5Y2 271 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 ROCK1Q13464 1354 aa0.79□□□□□ -2.28
PRPF40A-208ENST00000472760 IGHV3-33P01772 117 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 FABP2P12104 132 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 GNG10P50151 68 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 MRPS36P82909 103 aaKnown RBP0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 SPINK9Q5DT21 86 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 DCUN1D2Q6PH85 259 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 OR4B1Q8NGF8 309 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 ISOC1Q96CN7 298 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 EFCAB11Q9BUY7 163 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 NAT8BQ9UHF3 227 aa0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 BOKQ9UMX3 212 aaPredicted RBP0.78□□□□□ -2.28
PRPF40A-208ENST00000472760 SYNMO15061 1565 aa0.78□□□□□ -2.29
PRPF40A-208ENST00000472760 N4BP2Q86UW6 1770 aaPredicted RBP0.78□□□□□ -2.29
PRPF40A-208ENST00000472760 TRBV30A0A0K0K1B3 111 aa0.77□□□□□ -2.29
PRPF40A-208ENST00000472760 TRDV1A0A1B0GX56 115 aa0.77□□□□□ -2.29
PRPF40A-208ENST00000472760 MAP1LC3B2A6NCE7 125 aa0.77□□□□□ -2.29
PRPF40A-208ENST00000472760 NUPR2A6NF83 97 aa0.77□□□□□ -2.29
PRPF40A-208ENST00000472760 C5orf58C9J3I9 102 aa0.77□□□□□ -2.29
PRPF40A-208ENST00000472760 FABP4P15090 132 aa0.77□□□□□ -2.29
PRPF40A-208ENST00000472760 OCIAD2Q56VL3 154 aa0.77□□□□□ -2.29
PRPF40A-208ENST00000472760 TECPR2O15040 1411 aa0.77□□□□□ -2.29
PRPF40A-208ENST00000472760 KIAA1107Q9UPP5 1409 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 PFDN1O60925 122 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 FXYD4P59646 89 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 ZCCHC23Q6ZST2 131 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 LIMD2Q9BT23 127 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 C10orf95Q9H7T3 257 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 LRTM1Q9HBL6 345 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 IL20Q9NYY1 176 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 UNC13CQ8NB66 2214 aa0.76□□□□□ -2.29
PRPF40A-208ENST00000472760 TRAPPC8Q9Y2L5 1435 aa0.75□□□□□ -2.29
PRPF40A-208ENST00000472760 ZNF727A8MUV8 499 aa0.75□□□□□ -2.29
PRPF40A-208ENST00000472760 K7EIL1 84 aa0.75□□□□□ -2.29
PRPF40A-208ENST00000472760 FOXA3P55318 350 aaPredicted RBP0.75□□□□□ -2.29
PRPF40A-208ENST00000472760 Q6ZQY7 126 aa0.75□□□□□ -2.29
PRPF40A-208ENST00000472760 ANGPTL5Q86XS5 388 aa0.75□□□□□ -2.29
PRPF40A-208ENST00000472760 LINC00269Q8N2A0 174 aa0.75□□□□□ -2.29
PRPF40A-208ENST00000472760 NIT2Q9NQR4 276 aa0.75□□□□□ -2.29
PRPF40A-208ENST00000472760 MED12Q93074 2177 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 BCL9O00512 1426 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 GABARAPH6UMI1 98 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 NEDD8Q15843 81 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 CASC2Q6XLA1 102 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 STX12Q86Y82 276 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 OR5H6Q8NGV6 325 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 OR5AK2Q8NH90 309 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 DIRC1Q969H9 104 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 PCBD2Q9H0N5 130 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 TAF9BQ9HBM6 251 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 ADGBQ8N7X0 1667 aa0.74□□□□□ -2.29
PRPF40A-208ENST00000472760 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 FREM3P0C091 2139 aa0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 MYO18AQ92614 2054 aaKnown RBP0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 SDC2P34741 201 aa0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 Q86TA4 180 aa0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 CCL4L1Q8NHW4 92 aa0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 CCDC32Q9BV29 185 aa0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 LAMTOR2Q9Y2Q5 125 aa0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 PTPRFP10586 1907 aa0.73□□□□□ -2.29
PRPF40A-208ENST00000472760 A0A0J9YY99 117 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 C3orf85A0A1B0GTC6 90 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 H7BYZ3 331 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 TRACP01848 142 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 BCL2P10415 239 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 S100A11P31949 105 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 SPINT3P49223 89 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 NDUFA6P56556 154 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 RPL37AP61513 92 aaKnown RBP0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 TMEM78Q5T7P6 136 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 ATOH7Q8N100 152 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 GRPEL2Q8TAA5 225 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 PRELID3AQ96N28 172 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 ATPIF1Q9UII2 106 aa0.72□□□□□ -2.29
PRPF40A-208ENST00000472760 A0A0D9SG42 100 aa0.71□□□□□ -2.3
PRPF40A-208ENST00000472760 TPT1P13693 172 aaKnown RBP0.71□□□□□ -2.3
PRPF40A-208ENST00000472760 PDE6GP18545 87 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms