RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 GFRA4Q9GZZ7 299 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 Q9H3A6 140 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 TMEM14CQ9P0S9 112 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 IGHV4-61A0A0C4DH41 118 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 C19orf71A6NCJ1 209 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 GNG7O60262 68 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 LTAP01374 205 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 DEFB125Q8N687 156 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 RNF125Q96EQ8 232 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 LOC102724200A0A096LPH7 203 aaPredicted RBP13.59□□□□□ -0.23
RRP1-202ENST00000471909 MUC21A0A0G2JKD1 596 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 MUC21A0A140T8X8 626 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 GOSR1O95249 250 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 HLA-DRB1P01911 266 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 IL4P05112 153 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 MFAP4P55083 255 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 MUC21Q5SSG8 566 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 PET117Q6UWS5 81 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 PIMREGQ9BSJ6 248 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 SHANK2-AS3Q9BTD1 123 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 USP24Q9UPU5 2620 aa13.59□□□□□ -0.23
RRP1-202ENST00000471909 TMEM238LA0A1B0GVL6 79 aa13.58□□□□□ -0.23
RRP1-202ENST00000471909 PAX8Q06710 450 aa13.58□□□□□ -0.23
RRP1-202ENST00000471909 ZNF48Q96MX3 618 aaPredicted RBP13.58□□□□□ -0.23
RRP1-202ENST00000471909 NDFIP1Q9BT67 221 aa13.58□□□□□ -0.23
RRP1-202ENST00000471909 SCRT2Q9NQ03 307 aa13.58□□□□□ -0.23
RRP1-202ENST00000471909 WI2-2373I1.2A0A1W2PRP0 233 aa13.58□□□□□ -0.24
RRP1-202ENST00000471909 OR2T8A6NH00 312 aa13.58□□□□□ -0.24
RRP1-202ENST00000471909 H3BRN7 92 aa13.58□□□□□ -0.24
RRP1-202ENST00000471909 RPS20P60866 119 aaKnown RBP13.58□□□□□ -0.24
RRP1-202ENST00000471909 C10orf105Q8TEF2 133 aa13.58□□□□□ -0.24
RRP1-202ENST00000471909 C21orf62Q9NYP8 219 aa13.58□□□□□ -0.24
RRP1-202ENST00000471909 CACNA1BQ00975 2339 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 TCRAP04437 139 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 BCL6BQ8N143 479 aaPredicted RBP13.57□□□□□ -0.24
RRP1-202ENST00000471909 HSPB8Q9UJY1 196 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 ABCA2Q9BZC7 2435 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 CBY3A6NI87 242 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 H0Y8G0 127 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 IGHV3-23P01764 117 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 THYN1Q9P016 225 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 RNF24Q9Y225 148 aa13.57□□□□□ -0.24
RRP1-202ENST00000471909 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
RRP1-202ENST00000471909 ZNF138P52744 262 aa13.56□□□□□ -0.24
RRP1-202ENST00000471909 MS4A6AQ9H2W1 248 aa13.56□□□□□ -0.24
RRP1-202ENST00000471909 ZFYVE26Q68DK2 2539 aa13.56□□□□□ -0.24
RRP1-202ENST00000471909 MYO18BQ8IUG5 2567 aa13.56□□□□□ -0.24
RRP1-202ENST00000471909 UTP20O75691 2785 aaKnown RBP13.56□□□□□ -0.24
RRP1-202ENST00000471909 IGHV3OR16-10A0A075B7F0 116 aa13.56□□□□□ -0.24
RRP1-202ENST00000471909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.56□□□□□ -0.24
RRP1-202ENST00000471909 COL8A1P27658 744 aa13.56□□□□□ -0.24
RRP1-202ENST00000471909 OTORQ9NRC9 128 aa13.56□□□□□ -0.24
RRP1-202ENST00000471909 PPBPP02775 128 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 HIST1H1AQ02539 215 aaPredicted RBP13.55□□□□□ -0.24
RRP1-202ENST00000471909 BPIFA4PQ86YQ2 179 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 EXOC3-AS1Q8N2X6 119 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 C17orf77Q96MU5 243 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 MCRIP2Q9BUT9 160 aaKnown RBP13.55□□□□□ -0.24
RRP1-202ENST00000471909 CST9LQ9H4G1 147 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 ZFHX3Q15911 3703 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 SPG11Q96JI7 2443 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 PRB1P04280 392 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 FCGR2BP31994 310 aaPredicted RBP13.55□□□□□ -0.24
RRP1-202ENST00000471909 ATP5J2P56134 94 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 AMMECR1LQ6DCA0 310 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
RRP1-202ENST00000471909 TIMM8BQ9Y5J9 83 aaPredicted RBP13.55□□□□□ -0.24
RRP1-202ENST00000471909 ATP6V0E1O15342 81 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 TRBV19A0A075B6N1 114 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 IGHV4-30-2A0A087WSY4 118 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 NPIPB6E9PJ23 425 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 HAX1O00165 279 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 NDUFS8O00217 210 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 MRPS12O15235 138 aaKnown RBP13.54□□□□□ -0.24
RRP1-202ENST00000471909 CSN3P07498 182 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 OCIAD2Q56VL3 154 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 CLEC2AQ6UVW9 174 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 Q86TA4 180 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 VPS25Q9BRG1 176 aa13.54□□□□□ -0.24
RRP1-202ENST00000471909 CELSR1Q9NYQ6 3014 aa13.53□□□□□ -0.24
RRP1-202ENST00000471909 A0A087X0K7 114 aa13.53□□□□□ -0.24
RRP1-202ENST00000471909 LINC01548A6NM66 108 aa13.53□□□□□ -0.24
RRP1-202ENST00000471909 CD5LO43866 347 aa13.53□□□□□ -0.24
RRP1-202ENST00000471909 CTSGP08311 255 aa13.53□□□□□ -0.24
RRP1-202ENST00000471909 ECSCRQ19T08 205 aa13.53□□□□□ -0.24
RRP1-202ENST00000471909 CHTOPQ9Y3Y2 248 aaKnown RBP13.53□□□□□ -0.24
RRP1-202ENST00000471909 CIARTQ8N365 385 aaPredicted RBP13.53□□□□□ -0.24
RRP1-202ENST00000471909 FAM110DQ8TAY7 271 aaPredicted RBP13.53□□□□□ -0.24
RRP1-202ENST00000471909 PMCHL2Q9BQD1 86 aa13.53□□□□□ -0.24
RRP1-202ENST00000471909 MAP1AP78559 2803 aaPredicted RBP13.52□□□□□ -0.24
RRP1-202ENST00000471909 CRYBG3Q68DQ2 2970 aa13.52□□□□□ -0.24
RRP1-202ENST00000471909 TRAV8-1A0A0A6YYK1 113 aa13.52□□□□□ -0.24
RRP1-202ENST00000471909 IGHV1-69DA0A0B4J2H0 117 aa13.52□□□□□ -0.24
RRP1-202ENST00000471909 IGHV1-69P01742 117 aa13.52□□□□□ -0.24
RRP1-202ENST00000471909 LINC01545Q5VT33 79 aa13.52□□□□□ -0.24
RRP1-202ENST00000471909 BRD3OSQ6XYD6 125 aa13.52□□□□□ -0.24
RRP1-202ENST00000471909 CELSR2Q9HCU4 2923 aa13.52□□□□□ -0.24
RRP1-202ENST00000471909 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
RRP1-202ENST00000471909 GPR183P32249 361 aa13.52□□□□□ -0.25
RRP1-202ENST00000471909 PSG9Q00887 426 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms