RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 PRNDQ9UKY0 176 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 BOKQ9UMX3 212 aaPredicted RBP-0.14□□□□□ -2.43
RBM39-228ENST00000471635 CAMSAP1Q5T5Y3 1602 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 COL7A1Q02388 2944 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 NCAPD3P42695 1498 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 TTC28Q96AY4 2481 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 NDUFC2O95298 119 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 IFNA4P05014 189 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 GNG5P63218 68 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 ASB16-AS1Q495Z4 193 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 IFT20Q8IY31 132 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 PXT1Q8NFP0 134 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 PAIP2Q9BPZ3 127 aaKnown RBP-0.15□□□□□ -2.43
RBM39-228ENST00000471635 PYCARDQ9ULZ3 195 aa-0.15□□□□□ -2.43
RBM39-228ENST00000471635 TRAV5A0A0B4J249 113 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 G3V2T6 193 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 HIST1H2BKO60814 126 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 HIST1H2BJP06899 126 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 REEP5Q00765 189 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 FADDQ13158 208 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 LINC00269Q8N2A0 174 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 C10orf111Q8N326 155 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 PHB2Q99623 299 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 UHRF1BP1Q6BDS2 1440 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 CD109Q6YHK3 1445 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 ABCA12Q86UK0 2595 aa-0.16□□□□□ -2.44
RBM39-228ENST00000471635 MACF1Q9UPN3 7388 aaKnown RBP-0.17□□□□□ -2.44
RBM39-228ENST00000471635 A6NN06 94 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 RIIAD1A6NNX1 92 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 H7C1C5 153 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 GPR31O00270 319 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 LYRM1O43325 122 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 IFNA14P01570 189 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 OGNP20774 298 aaKnown RBP-0.17□□□□□ -2.44
RBM39-228ENST00000471635 HSD11B1P28845 292 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 CAPZBP47756 277 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 LCN6P62502 163 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 DIAPH2-AS1Q14236 149 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 SCGB2B2Q4G0G5 96 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 BCORL1Q5H9F3 1711 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 C10orf99Q6UWK7 81 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 CASC2Q6XLA1 102 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 PHF5AQ7RTV0 110 aaKnown RBP-0.17□□□□□ -2.44
RBM39-228ENST00000471635 FAM216BQ8N7L0 139 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 MALSU1Q96EH3 234 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 CST11Q9H112 138 aa-0.17□□□□□ -2.44
RBM39-228ENST00000471635 CTTNBP2Q8WZ74 1663 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 AIPO00170 330 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 PIAS1O75925 651 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 ATG12O94817 140 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 CAV3P56539 151 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 HBBP68871 147 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 SNCBQ16143 134 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 VMA21Q3ZAQ7 101 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 C1orf140Q5VVS0 124 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 DHRS4L2Q6PKH6 230 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 LYG2Q86SG7 212 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 SH3BGRL3Q9H299 93 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 SS18L2Q9UHA2 77 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 CAMSAP2Q08AD1 1489 aa-0.18□□□□□ -2.44
RBM39-228ENST00000471635 IGHV3-30P01768 117 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 IGHV3-30-5P0DP03 117 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 PHBP35232 272 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 RPL37P61927 97 aaKnown RBP-0.19□□□□□ -2.44
RBM39-228ENST00000471635 GLYATL3Q5SZD4 288 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 AKR1C8PQ5T2L2 129 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 LPAR5Q9H1C0 372 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 TAF9BQ9HBM6 251 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 LYRM2Q9NU23 88 aaPredicted RBP-0.19□□□□□ -2.44
RBM39-228ENST00000471635 NAT8BQ9UHF3 227 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 SSR3Q9UNL2 185 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 ANK2Q01484 3957 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 RTL9Q8NET4 1388 aa-0.19□□□□□ -2.44
RBM39-228ENST00000471635 OTOGQ6ZRI0 2925 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 PIK3C2AO00443 1686 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 CST7O76096 145 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 APOA2P02652 100 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 CSN2P05814 226 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 NEDD8Q15843 81 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 FKBP1CQ5VVH2 108 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 XAF1Q6GPH4 301 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 OR2H1Q9GZK4 316 aa-0.2□□□□□ -2.44
RBM39-228ENST00000471635 HIVEP3Q5T1R4 2406 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 TMEM210A6NLX4 147 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 SULT1C4O75897 302 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 CD3DP04234 171 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 RPL35P42766 123 aaKnown RBP-0.21□□□□□ -2.44
RBM39-228ENST00000471635 POU6F1Q14863 301 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 SPINK13Q1W4C9 94 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 HACD4Q5VWC8 232 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 NUP35Q8NFH5 326 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 CCL4L1Q8NHW4 92 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 LINC00208Q96KT6 92 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 CARD19Q96LW7 228 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 OR4C12Q96R67 309 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 GINS3Q9BRX5 216 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 EFCAB11Q9BUY7 163 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 PBDC1Q9BVG4 233 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 TPRKBQ9Y3C4 175 aa-0.21□□□□□ -2.44
RBM39-228ENST00000471635 ASXL3Q9C0F0 2248 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms