RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SLC25A21Q9BQT8 299 aaPredicted RBP6.32□□□□□ -1.4
CPSF4-211ENST00000471455 GAGE12BA1L429 117 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 FNDC10F2Z333 226 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 H3BP45 60 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 NOL3O60936 208 aaKnown RBP6.31□□□□□ -1.4
CPSF4-211ENST00000471455 GAGE7O76087 117 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 SFT2D2O95562 160 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 GAGE12FP0CL80 117 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 GAGE12GP0CL81 117 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 GAGE12IP0CL82 117 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 LEPP41159 167 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 ERVFC1-1P60608 527 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 ICAM4Q14773 271 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 TMEM182Q6ZP80 229 aaPredicted RBP6.31□□□□□ -1.4
CPSF4-211ENST00000471455 ZNF546Q86UE3 836 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 UHRF2Q96PU4 802 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 ZNF586Q9NXT0 402 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 MGAT4CQ9UBM8 478 aa6.31□□□□□ -1.4
CPSF4-211ENST00000471455 FABP12A6NFH5 140 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 K7EPK0 472 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 HOXB5P09067 269 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 LINC00315P59091 139 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 UBE2MP61081 183 aaKnown RBP6.3□□□□□ -1.4
CPSF4-211ENST00000471455 DLK1P80370 383 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 ESRGQ1W209 222 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 NFE4Q86UQ8 179 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 BPIFA4PQ86YQ2 179 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 TOMM5Q8N4H5 51 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 ZNF680Q8NEM1 530 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 MCFD2Q8NI22 146 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 RAB2BQ8WUD1 216 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 FRZBQ92765 325 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 C8orf49Q96NF6 230 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 ODF3Q96PU9 254 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 BCL7BQ9BQE9 202 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 PYGO2Q9BRQ0 406 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 MRPS26Q9BYN8 205 aaKnown RBP6.3□□□□□ -1.4
CPSF4-211ENST00000471455 ARL6Q9H0F7 186 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 ARV1Q9H2C2 271 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 ZNF331Q9NQX6 463 aaPredicted RBP6.3□□□□□ -1.4
CPSF4-211ENST00000471455 PSENENQ9NZ42 101 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 PXMP4Q9Y6I8 212 aa6.3□□□□□ -1.4
CPSF4-211ENST00000471455 TRGV2A0A075B6R0 118 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 PMS2P5A8MQ11 134 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 GOSR2O14653 212 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 SIVA1O15304 175 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 IFNA5P01569 189 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 SMIM18P0DKX4 95 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 DAZ2Q13117 558 aaKnown RBP6.29□□□□□ -1.4
CPSF4-211ENST00000471455 PPP1R1AQ13522 171 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 SPCS2Q15005 226 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 GFI1BQ5VTD9 330 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 OR10P1Q8NGE3 313 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 NPVFQ9HCQ7 196 aa6.29□□□□□ -1.4
CPSF4-211ENST00000471455 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 SSSCA1O60232 199 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 COX7A2P2O60397 106 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 POLR2GP62487 172 aaKnown RBP eCLIP6.28□□□□□ -1.4
CPSF4-211ENST00000471455 GUK1Q16774 197 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 C4orf46Q504U0 113 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 LINC00305Q7Z4B0 112 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 ZBTB8BQ8NAP8 495 aaPredicted RBP6.28□□□□□ -1.4
CPSF4-211ENST00000471455 DYNC2LI1Q8TCX1 351 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 SMIM8Q96KF7 97 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 C18orf15Q96N68 181 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 TMPRSS5Q9H3S3 457 aa6.28□□□□□ -1.4
CPSF4-211ENST00000471455 HERC1Q15751 4861 aa6.27□□□□□ -1.41
CPSF4-211ENST00000471455 TMBIM6P55061 237 aa6.27□□□□□ -1.41
CPSF4-211ENST00000471455 RRAS2P62070 204 aaPredicted RBP6.27□□□□□ -1.41
CPSF4-211ENST00000471455 SLC38A11Q08AI6 406 aa6.27□□□□□ -1.41
CPSF4-211ENST00000471455 RAB31Q13636 194 aa6.27□□□□□ -1.41
CPSF4-211ENST00000471455 PYDC2Q56P42 97 aa6.27□□□□□ -1.41
CPSF4-211ENST00000471455 GGACTQ9BVM4 153 aa6.27□□□□□ -1.41
CPSF4-211ENST00000471455 ICOSQ9Y6W8 199 aa6.27□□□□□ -1.41
CPSF4-211ENST00000471455 A0A096LPF7 62 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 TRGV1A0A0A0MS02 117 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 TRAV12-3A0A0B4J271 114 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 J3KRW8 73 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 K7EP13 123 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 MRPS12O15235 138 aaKnown RBP6.26□□□□□ -1.41
CPSF4-211ENST00000471455 TSC22D2O75157 780 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 NXPH4O95158 308 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 SLC25A5P05141 298 aaKnown RBP6.26□□□□□ -1.41
CPSF4-211ENST00000471455 METTL15P1P0C7V9 234 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 TNFSF8P32971 234 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 TAS2R30P59541 319 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 SLAQ13239 276 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 RNF151Q2KHN1 245 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 Q5VSD8 79 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 C10orf113Q5VZT2 155 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 TMEM14EPQ6UXP3 125 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
CPSF4-211ENST00000471455 Q6ZTI0 123 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 LYPD1Q8N2G4 141 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 TRIM63Q969Q1 353 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 SOSTQ9BQB4 213 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 FUT9Q9Y231 359 aa6.26□□□□□ -1.41
CPSF4-211ENST00000471455 C7orf71A4D174 169 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms