RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PAX6P26367 422 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 CNTFRP26992 372 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 OR2B8PP59922 312 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 ERHP84090 104 aaKnown RBP3.36□□□□□ -1.87
CCDC39-202ENST00000471307 PRCDQ00LT1 54 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 PLGLAQ15195 96 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 Q5BKY6 102 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 PRSS54Q6PEW0 395 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 HSD17B13Q7Z5P4 300 aaPredicted RBP3.36□□□□□ -1.87
CCDC39-202ENST00000471307 FAM71E2Q8N5Q1 922 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 TMEM86BQ8N661 226 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 Q8N9W7 124 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 SMIM8Q96KF7 97 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 OR5B12Q96R08 314 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 RASL11BQ9BPW5 248 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 FBXL15Q9H469 300 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF430Q9H8G1 570 aaPredicted RBP3.36□□□□□ -1.87
CCDC39-202ENST00000471307 ENY2Q9NPA8 101 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 NDUFA4L2Q9NRX3 87 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 SOX21Q9Y651 276 aaPredicted RBP3.36□□□□□ -1.87
CCDC39-202ENST00000471307 WSB1Q9Y6I7 421 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 U3KQ87 197 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 NSD1Q96L73 2696 aaPredicted RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 TRAV14DV4A0A0A6YYC5 116 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 IGHV7-81A0A0B4J1V7 117 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 A0A0D9SG52 128 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 G3V3Q6 166 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 CLDN34H7C241 214 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 SSSCA1O60232 199 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 SNAPINO95295 136 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 OR8U8P0C7N1 319 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 SNCAP37840 140 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 HTR2BP41595 481 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 VDAC2P45880 294 aaPredicted RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 RPL27AP46776 148 aaKnown RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 SUB1P53999 127 aaKnown RBP eCLIP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 S100A10P60903 97 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 POLR2GP62487 172 aaKnown RBP eCLIP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 TMEM267Q0VDI3 215 aaPredicted RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 OR2F1Q13607 317 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 CLINT1Q14677 625 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 FXYD3Q14802 87 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 TNXAQ16473 311 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 LY6EQ16553 131 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 PSG3Q16557 428 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 SIGLECL1Q8N7X8 197 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 C5orf56Q8N8D9 126 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 DTD1Q8TEA8 209 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF418Q8TF45 676 aaPredicted RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 C22orf15Q8WYQ4 148 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 EEF1AKMT3Q96AZ1 226 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 RBMXL1Q96E39 390 aaKnown RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 SMR3AQ99954 134 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 RARRES2Q99969 163 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 SLC25A31Q9H0C2 315 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 C11orf1Q9H5F2 150 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF331Q9NQX6 463 aaPredicted RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 LYRM2Q9NU23 88 aaPredicted RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 PSENENQ9NZ42 101 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 OR5AC2Q9NZP5 309 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 VPREB3Q9UKI3 123 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 TNFSF18Q9UNG2 199 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 RCL1Q9Y2P8 373 aaKnown RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 LSM5Q9Y4Y9 91 aaKnown RBP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 F8P00451 2351 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 SVEP1Q4LDE5 3571 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 NF1P21359 2839 aa3.35□□□□□ -1.87
CCDC39-202ENST00000471307 NIPBLQ6KC79 2804 aaeCLIP3.35□□□□□ -1.87
CCDC39-202ENST00000471307 MAST4O15021 2626 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 IGHV3OR16-13A0A075B7E8 117 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 FXYD6-FXYD2A0A087WZ82 144 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 MDFIC2A0A1B0GVS7 189 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 SMLR1H3BR10 107 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 AGPAT2O15120 278 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 CYB5BO43169 146 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 MPDU1O75352 247 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 CA2P00918 260 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 IFNA10P01566 189 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 IGHG2P01859 326 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 OR13C7P0DN81 318 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 IAPPP10997 89 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 IGLL1P15814 213 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 CTRB1P17538 263 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 RPL12P30050 165 aaKnown RBP3.34□□□□□ -1.87
CCDC39-202ENST00000471307 S100A11P31949 105 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 EIF2B2P49770 351 aaKnown RBP3.34□□□□□ -1.87
CCDC39-202ENST00000471307 CAV2P51636 162 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 BAXQ07812 192 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF345Q14585 488 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 ATP6V1FQ16864 119 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 BSXQ3C1V8 233 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 AKIRIN2Q53H80 203 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 SPANXN5Q5MJ07 72 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 CTRB2Q6GPI1 263 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 IL34Q6ZMJ4 242 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 TTC9CQ8N5M4 171 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 TMEM252Q8N6L7 170 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 OR10W1Q8NGF6 305 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 SGMS2Q8NHU3 365 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 DCUN1D4Q92564 292 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms