RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 DMBT1Q9UGM3 2413 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-204ENST00000471245 TRAV8-6A0A0B4J262 113 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 MCRIP1C9JLW8 97 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF207O43670 478 aaKnown RBP3.41□□□□□ -1.86
CKS1B-204ENST00000471245 YPEL1O60688 119 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 OR2A4O95047 310 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 CA2P00918 260 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 HLA-AP01891 365 aaKnown RBP3.41□□□□□ -1.86
CKS1B-204ENST00000471245 MAS1P04201 325 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 IGKV1-16P04430 117 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 RPSAP08865 295 aaKnown RBP3.41□□□□□ -1.86
CKS1B-204ENST00000471245 HLA-DMAP28067 261 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 TCTAP57738 103 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 IFITM3Q01628 133 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 TMEM267Q0VDI3 215 aaPredicted RBP3.41□□□□□ -1.86
CKS1B-204ENST00000471245 HMGN3Q15651 99 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 DEFB135Q30KP9 77 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF880Q6PDB4 577 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 LINC00596Q86U02 117 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 RXFP4Q8TDU9 374 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF414Q96IQ9 312 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 YPEL2Q96QA6 119 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 PARD6GQ9BYG4 376 aaPredicted RBP3.41□□□□□ -1.86
CKS1B-204ENST00000471245 TMEM138Q9NPI0 162 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 METTL1Q9UBP6 276 aaKnown RBP3.41□□□□□ -1.86
CKS1B-204ENST00000471245 JPT1Q9UK76 154 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 AP4S1Q9Y587 144 aa3.41□□□□□ -1.86
CKS1B-204ENST00000471245 YTHDF2Q9Y5A9 579 aaKnown RBP3.41□□□□□ -1.86
CKS1B-204ENST00000471245 GYG2O15488 501 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 NAPSAO96009 420 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 APELAP0DMC3 54 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 GTF2F2P13984 249 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 DEFB114Q30KQ6 69 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 DNAL1Q4LDG9 190 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 OR10K2Q6IF99 312 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 GLIPR1L1Q6UWM5 242 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 STX19Q8N4C7 294 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 ZNF645Q8N7E2 425 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 GRPEL2Q8TAA5 225 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 MRPS24Q96EL2 167 aaKnown RBP3.4□□□□□ -1.87
CKS1B-204ENST00000471245 PGLYRP3Q96LB9 341 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 Q96MT0 163 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 FAAP24Q9BTP7 215 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 TMEM243Q9BU79 118 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 RAB22AQ9UL26 194 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 ORC6Q9Y5N6 252 aa3.4□□□□□ -1.87
CKS1B-204ENST00000471245 IGHV6-1A0A0B4J1U7 121 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 IGKV1-6A0A0C4DH72 117 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 OR5H14A6NHG9 310 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 IGLL5B9A064 214 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 M0R2N4 97 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 RBFOX2O43251 390 aaKnown RBP eCLIP3.39□□□□□ -1.87
CKS1B-204ENST00000471245 ATP8B1O43520 1251 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 PDCD6O75340 191 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 PRH1P02810 166 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 IFNA4P05014 189 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 TSPOP30536 169 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 QRFPP83859 136 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 INSL4Q14641 139 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 FXYD3Q14802 87 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 PLGLAQ15195 96 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 RPL22L1Q6P5R6 122 aaKnown RBP3.39□□□□□ -1.87
CKS1B-204ENST00000471245 C6orf201Q7Z4U5 140 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 DYNLRB2Q8TF09 96 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 PYDC1Q8WXC3 89 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 GHSRQ92847 366 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 CPNE2Q96FN4 548 aaPredicted RBP3.39□□□□□ -1.87
CKS1B-204ENST00000471245 OR10C1Q96KK4 312 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 ENOPH1Q9UHY7 261 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 ZNF230Q9UIE0 474 aaPredicted RBP3.39□□□□□ -1.87
CKS1B-204ENST00000471245 WASHC3Q9Y3C0 194 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 NACAE9PAV3 2078 aa3.39□□□□□ -1.87
CKS1B-204ENST00000471245 MYCBP2O75592 4640 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 A0A1B0GW64 132 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 A0A1B0GXF2 115 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 C2orf70A6NJV1 201 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 PPP5D1E7EU14 171 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 H3BUA1 57 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 BET1O15155 118 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 SLC22A1O15245 554 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 NDUFS5O43920 106 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 HPGDSO60760 199 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 RBBP9O75884 186 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 HLA-DQA1P01909 254 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 CD2P06729 351 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 SCTP09683 121 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 ZNF688P0C7X2 276 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 PPP3R1P63098 170 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 Q499Y3 187 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 CCDC58Q4VC31 144 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 ENKURQ8TC29 256 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 GALMQ96C23 342 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 SMIM19Q96E16 107 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 TMEM56Q96MV1 263 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 DERL3Q96Q80 235 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 S100A13Q99584 98 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms