RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 RAB4BP61018 213 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 GCN1Q92616 2671 aaKnown RBP13.06□□□□□ -0.32
SMARCD3-206ENST00000470588 IGHV3OR16-8A0A075B7F1 116 aa13.06□□□□□ -0.32
SMARCD3-206ENST00000470588 APCSP02743 223 aa13.06□□□□□ -0.32
SMARCD3-206ENST00000470588 VPS13CQ709C8 3753 aa13.06□□□□□ -0.32
SMARCD3-206ENST00000470588 ARL3P36405 182 aa13.05□□□□□ -0.32
SMARCD3-206ENST00000470588 SAPCD1Q5SSQ6 148 aa13.05□□□□□ -0.32
SMARCD3-206ENST00000470588 ZC2HC1AQ96GY0 325 aa13.05□□□□□ -0.32
SMARCD3-206ENST00000470588 NOL4LQ96MY1 436 aaPredicted RBP13.05□□□□□ -0.32
SMARCD3-206ENST00000470588 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 TCF24Q7RTU0 167 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 COX8CQ7Z4L0 72 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 TMEM256Q8N2U0 113 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 SLC50A1Q9BRV3 221 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 A0A0G2JLM5 398 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 A0A1B0GXF2 115 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 GRIFINA4D1Z8 144 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 CHEK1O14757 476 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 ESDP10768 282 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 FOXA3P55318 350 aaPredicted RBP13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 LCN12Q6JVE5 192 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 OR2D3Q8NGH3 330 aa13.04□□□□□ -0.32
SMARCD3-206ENST00000470588 NDUFA4O00483 81 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 IGHV4-59P01825 116 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 IGHG4P01861 327 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 PF4V1P10720 104 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 OR10J3Q5JRS4 329 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 Q6ZS46 218 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 GTSF1Q8WW33 167 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 MAP1AP78559 2803 aaPredicted RBP13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
SMARCD3-206ENST00000470588 CT45A10P0DMU9 189 aa13.02□□□□□ -0.32
SMARCD3-206ENST00000470588 PAFAH1B2P68402 229 aa13.02□□□□□ -0.32
SMARCD3-206ENST00000470588 CFHR3Q02985 330 aa13.02□□□□□ -0.32
SMARCD3-206ENST00000470588 BAGE3Q86Y29 109 aa13.02□□□□□ -0.32
SMARCD3-206ENST00000470588 TP53TG3Q9ULZ0 132 aa13.02□□□□□ -0.32
SMARCD3-206ENST00000470588 NUPR1O60356 82 aa13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 APOHP02749 345 aaPredicted RBP13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 CRIP1P50238 77 aa13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 JOSD1Q15040 202 aaPredicted RBP13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 GDF5OSQ5U4N7 250 aa13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 Q6YL49 198 aa13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 PGLYRP4Q96LB8 373 aa13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 KLK15Q9H2R5 256 aa13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 VPREB3Q9UKI3 123 aa13.02□□□□□ -0.33
SMARCD3-206ENST00000470588 CSMD2Q7Z408 3487 aa13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 IGKV2-40A0A087WW87 121 aaPredicted RBP13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 IGKV2D-40P01614 121 aaPredicted RBP13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 HBBP68871 147 aa13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 MRPL53Q96EL3 112 aaKnown RBP13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 PRR25Q96S07 402 aa13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 GSN-AS1Q9NRJ2 163 aa13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 CLEC5AQ9NY25 188 aa13.01□□□□□ -0.33
SMARCD3-206ENST00000470588 IGHV3-66A0A0C4DH42 116 aa13□□□□□ -0.33
SMARCD3-206ENST00000470588 A0A1B0GUS0 222 aa13□□□□□ -0.33
SMARCD3-206ENST00000470588 RBAKDNA6NC62 111 aa13□□□□□ -0.33
SMARCD3-206ENST00000470588 A8MWP6 167 aa13□□□□□ -0.33
SMARCD3-206ENST00000470588 ZNF207O43670 478 aaKnown RBP13□□□□□ -0.33
SMARCD3-206ENST00000470588 CD5LO43866 347 aa13□□□□□ -0.33
SMARCD3-206ENST00000470588 Q71RC1 249 aaPredicted RBP13□□□□□ -0.33
SMARCD3-206ENST00000470588 OR4X2Q8NGF9 303 aa13□□□□□ -0.33
SMARCD3-206ENST00000470588 C8orf49Q96NF6 230 aa13□□□□□ -0.33
SMARCD3-206ENST00000470588 TMEM89A2RUT3 159 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 HAX1O00165 279 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 CAMPP49913 170 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 FAM209BQ5JX69 171 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 IGFL4Q6B9Z1 124 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 ZNF705FA8MVS1 300 aaPredicted RBP12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 SERF1AO75920 110 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 SRIP30626 198 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 SLAQ13239 276 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 GLMPQ8WWB7 406 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 ASCL2Q99929 193 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 VGLL1Q99990 258 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 PRDM13Q9H4Q3 707 aa12.99□□□□□ -0.33
SMARCD3-206ENST00000470588 UNC79Q9P2D8 2635 aa12.98□□□□□ -0.33
SMARCD3-206ENST00000470588 TRBV12-3P01733 135 aa12.98□□□□□ -0.33
SMARCD3-206ENST00000470588 BMI1P35226 326 aa12.98□□□□□ -0.33
SMARCD3-206ENST00000470588 LINC00310P59036 64 aa12.98□□□□□ -0.33
SMARCD3-206ENST00000470588 FAM162BQ5T6X4 162 aa12.98□□□□□ -0.33
SMARCD3-206ENST00000470588 Q6AWC8 147 aa12.98□□□□□ -0.33
SMARCD3-206ENST00000470588 YAE1D1Q9NRH1 226 aa12.98□□□□□ -0.33
SMARCD3-206ENST00000470588 NBPF19A0A087WUL8 3843 aa12.98□□□□□ -0.33
SMARCD3-206ENST00000470588 IGHV3OR16-13A0A075B7E8 117 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 IGHV3-49A0A0A0MS15 119 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 IGHV3-74A0A0B4J1X5 117 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 A0A1W2PS18 150 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 IGHV3-11P01762 117 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 GZMBP10144 247 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 PRB4P10163 310 aaPredicted RBP12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 RIGQ13278 110 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 SCGB2A2Q13296 93 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 NDFIP1Q9BT67 221 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 ITPR3Q14573 2671 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms