RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 M0R378 163 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 FFAR1O14842 300 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 IL4P05112 153 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF883P0CG24 379 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 SLC25A16P16260 332 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 WDR38Q5JTN6 314 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 ZFP2Q6ZN57 461 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 SFTPA1Q8IWL2 248 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 C6orf223Q8N319 242 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 RITA1Q96K30 269 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 SLC25A2Q9BXI2 301 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF492Q9P255 531 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 CTSZQ9UBR2 303 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 SPTBN4Q9H254 2564 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 COL2A1P02458 1487 aaPredicted RBP3.92□□□□□ -1.78
COL3A1-205ENST00000470167 FNDC1Q4ZHG4 1894 aaPredicted RBP3.92□□□□□ -1.78
COL3A1-205ENST00000470167 SCN5AQ14524 2016 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 KAT6AQ92794 2004 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 TRBV5-7A0A0A0MS05 114 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 TRAV41A0A0B4J266 112 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 TRBV5-5A0A0J9YX44 114 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 LOC101059948A0A1B0GTJ6 334 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 C9JCJ5 164 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 SLC25A20O43772 301 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 LGALS3P17931 250 aaKnown RBP3.92□□□□□ -1.78
COL3A1-205ENST00000470167 HERVK_113P61574 105 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 RPL18Q07020 188 aaKnown RBP3.92□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF816Q0VGE8 651 aaPredicted RBP3.92□□□□□ -1.78
COL3A1-205ENST00000470167 FAM222AQ5U5X8 452 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 PHF5AQ7RTV0 110 aaKnown RBP3.92□□□□□ -1.78
COL3A1-205ENST00000470167 ATP5L2Q7Z4Y8 100 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 LINC00596Q86U02 117 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 PDPNQ86YL7 162 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 OR8A1Q8NGG7 326 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 CCL17Q92583 94 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 C4orf45Q96LM5 186 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 METTL26Q96S19 204 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 OVOL2Q9BRP0 275 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 TIMM9Q9Y5J7 89 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 SCN8AQ9UQD0 1980 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 FANCMQ8IYD8 2048 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 DOCK6Q96HP0 2047 aa3.92□□□□□ -1.78
COL3A1-205ENST00000470167 RAI1Q7Z5J4 1906 aaPredicted RBP3.91□□□□□ -1.78
COL3A1-205ENST00000470167 NINQ8N4C6 2090 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 A0A0A6YYD4 124 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 IBA57-AS1B1ANH7 110 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF73O43830 326 aaPredicted RBP3.91□□□□□ -1.78
COL3A1-205ENST00000470167 NGFP01138 241 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 ADIGQ0VDE8 80 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF56Q15929 161 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 PAPPA-AS1Q5QFB9 102 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 C9orf57Q5W0N0 161 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 FAM104BQ5XKR9 115 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 MORN4Q8NDC4 146 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 FAM3DQ96BQ1 224 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 PGLYRP4Q96LB8 373 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 KRTAP3-1Q9BYR8 98 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 ARRDC1-AS1Q9H2J1 176 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 MOB4Q9Y3A3 225 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 V9GYV3 84 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 ARID1BQ8NFD5 2236 aaPredicted RBP3.91□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF236Q9UL36 1845 aa3.91□□□□□ -1.78
COL3A1-205ENST00000470167 ASH1LQ9NR48 2969 aaKnown RBP3.9□□□□□ -1.78
COL3A1-205ENST00000470167 BAZ2BQ9UIF8 2168 aaKnown RBP3.9□□□□□ -1.78
COL3A1-205ENST00000470167 PAPPA2Q9BXP8 1791 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 TRBV7-3A0A075B6L6 115 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 CTXND1A0A1B0GTU2 59 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 SMIM27A0A1W2PRY6 76 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 LINC00473A8K010 186 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 H3BMM0 161 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 UBE2L6O14933 153 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 NPPCP23582 126 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 UBE2D1P51668 147 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 SYNJ2BPP57105 145 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 PCBD1P61457 104 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 RPL38P63173 70 aaKnown RBP3.9□□□□□ -1.79
COL3A1-205ENST00000470167 TMEM155Q4W5P6 130 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 PIK3CD-AS1Q5SR53 167 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 C1orf100Q5SVJ3 147 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 MIC13Q5XKP0 118 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 FRG2Q64ET8 278 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 Q6ZVQ6 151 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 LCA10Q71F78 164 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 MKXQ8IYA7 352 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 Q8N8P6 123 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 TMEM75Q8N9X5 138 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 RNASE6Q93091 150 aaKnown RBP3.9□□□□□ -1.79
COL3A1-205ENST00000470167 UBE2WQ96B02 151 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 CNRIP1Q96F85 164 aaPredicted RBP3.9□□□□□ -1.79
COL3A1-205ENST00000470167 LYZL4Q96KX0 146 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 PRR25Q96S07 402 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 ZNF747Q9BV97 191 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 OSTCQ9NRP0 149 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 LINC00588Q9Y4M8 146 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 CFAP47Q6ZTR5 3102 aa3.9□□□□□ -1.79
COL3A1-205ENST00000470167 VWA8A3KMH1 1905 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 SCN10AQ9Y5Y9 1956 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms