RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 RAI1Q7Z5J4 1906 aaPredicted RBP6.34□□□□□ -1.39
TPM3-215ENST00000469717 ZNF292O60281 2723 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 FABP2P12104 132 aa6.34□□□□□ -1.4
TPM3-215ENST00000469717 ETDBQ3ZM63 59 aa6.34□□□□□ -1.4
TPM3-215ENST00000469717 ZNF562Q6V9R5 426 aa6.34□□□□□ -1.4
TPM3-215ENST00000469717 AMN1Q8IY45 258 aa6.34□□□□□ -1.4
TPM3-215ENST00000469717 C19orf24Q9BVV8 132 aa6.34□□□□□ -1.4
TPM3-215ENST00000469717 SIGLEC8Q9NYZ4 499 aa6.34□□□□□ -1.4
TPM3-215ENST00000469717 SS18L2Q9UHA2 77 aa6.34□□□□□ -1.4
TPM3-215ENST00000469717 KLF12Q9Y4X4 402 aa6.34□□□□□ -1.4
TPM3-215ENST00000469717 TCRBV4S1A1TA0A5B7 111 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 SRRM5B3KS81 715 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 SPRY3O43610 288 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 TSPAN13O95857 204 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 WT1P19544 449 aaPredicted RBP6.33□□□□□ -1.4
TPM3-215ENST00000469717 PPIFP30405 207 aaKnown RBP6.33□□□□□ -1.4
TPM3-215ENST00000469717 KIR2DS2P43631 304 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 FAM162BQ5T6X4 162 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 BCL6BQ8N143 479 aaPredicted RBP6.33□□□□□ -1.4
TPM3-215ENST00000469717 MRAP2Q96G30 205 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 RITA1Q96K30 269 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 GAS8-AS1O95177 125 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 CGB3P0DN86 165 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 CGB7P0DN87 165 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 CSN1S1P47710 185 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 ATP5J2P56134 94 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
TPM3-215ENST00000469717 DCHS2Q6V1P9 2916 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 IGHV3-72A0A0B4J1Y9 119 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 A0A1B0GUT8 65 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 H3BMG7 143 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 TGFAP01135 160 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 DLX1P56177 255 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 Q86TA4 180 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 CCL13Q99616 98 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 NDUFA4L2Q9NRX3 87 aa6.33□□□□□ -1.4
TPM3-215ENST00000469717 LRBAP50851 2863 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 KBTBD11-OT1A0A1B0GTJ5 212 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 HAX1O00165 279 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 IGLV2-11P01706 119 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 ATP5IP56385 69 aaPredicted RBP6.32□□□□□ -1.4
TPM3-215ENST00000469717 PRR30Q53SZ7 412 aaPredicted RBP6.32□□□□□ -1.4
TPM3-215ENST00000469717 MALRD1Q5VYJ5 2156 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 GP9P14770 177 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 NBL1P41271 181 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 OR1L4Q8NGR5 311 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 SPAG8Q99932 426 aaPredicted RBP6.32□□□□□ -1.4
TPM3-215ENST00000469717 HECTD1Q9ULT8 2610 aa6.32□□□□□ -1.4
TPM3-215ENST00000469717 M0R3E3 92 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 CCL3L1P16619 93 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 CRIP1P50238 77 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 ERHP84090 104 aaKnown RBP6.31□□□□□ -1.4
TPM3-215ENST00000469717 OR5AN1Q8NGI8 311 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 ZNF414Q96IQ9 312 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 A0A1W2PNU3 283 aaPredicted RBP6.31□□□□□ -1.4
TPM3-215ENST00000469717 POU2AF1Q16633 256 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 C8orf49Q96NF6 230 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 RPUSD1Q9UJJ7 312 aaKnown RBP6.31□□□□□ -1.4
TPM3-215ENST00000469717 A0A1W2PPI3 338 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 NPIPB6E9PJ23 425 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 FMC1Q96HJ9 113 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 VGLL1Q99990 258 aa6.31□□□□□ -1.4
TPM3-215ENST00000469717 SMIM13P0DJ93 91 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 LYZP61626 148 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 SPANXB1Q9NS25 103 aaPredicted RBP6.3□□□□□ -1.4
TPM3-215ENST00000469717 IGKV3-15P01624 115 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 UCNP55089 124 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 CT83Q5H943 113 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 ZNF492Q9P255 531 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 IGHV1-18A0A0C4DH31 117 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 K7EM74 188 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 NPYP01303 97 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 FAM27E3Q08E93 113 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 GTSCR1Q86UQ5 136 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 ZCCHC24Q8N2G6 241 aaKnown RBP6.3□□□□□ -1.4
TPM3-215ENST00000469717 RPRMLQ8N4K4 120 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 CCL17Q92583 94 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 IFI27L1Q96BM0 104 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 PRELID3AQ96N28 172 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 C20orf78Q9BR46 151 aa6.3□□□□□ -1.4
TPM3-215ENST00000469717 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
TPM3-215ENST00000469717 NDUFS7O75251 213 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 GATA3P23771 443 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 CD300EQ496F6 205 aaPredicted RBP6.29□□□□□ -1.4
TPM3-215ENST00000469717 LINC01560Q8TB33 94 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 PHLDA1Q8WV24 401 aaPredicted RBP6.29□□□□□ -1.4
TPM3-215ENST00000469717 SSUH2Q9Y2M2 353 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 S4R3C0 116 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 SMIM17P0DL12 118 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 TNFRSF1AP19438 455 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 LGALS9BQ3B8N2 356 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 LGALS9CQ6DKI2 356 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 LYZL1Q6UWQ5 148 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 SMIM20Q8N5G0 67 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 OR9G4Q8NGQ1 327 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 PPP1R35Q8TAP8 253 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms