RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.39□□□□□ -0.59
CBWD3-205ENST00000469687 IGHV3-66A0A0C4DH42 116 aa11.39□□□□□ -0.59
CBWD3-205ENST00000469687 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
CBWD3-205ENST00000469687 CLEC3BP05452 202 aa11.39□□□□□ -0.59
CBWD3-205ENST00000469687 CSN1S1P47710 185 aa11.39□□□□□ -0.59
CBWD3-205ENST00000469687 PSG9Q00887 426 aa11.39□□□□□ -0.59
CBWD3-205ENST00000469687 S100A7AQ86SG5 101 aa11.39□□□□□ -0.59
CBWD3-205ENST00000469687 TMEM219Q86XT9 240 aa11.39□□□□□ -0.59
CBWD3-205ENST00000469687 CFAP46Q8IYW2 2715 aa11.39□□□□□ -0.59
CBWD3-205ENST00000469687 MUC21A0A0G2JKD1 596 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 CENPVL3A0A0U1RRI6 287 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 MUC21A0A140T8X8 626 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 NPFFO15130 113 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 SH2D1AO60880 128 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 CSN3P07498 182 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 CT45A10P0DMU9 189 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 IGLC3P0DOY3 106 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 MUC21Q5SSG8 566 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 CCDC140Q96MF4 163 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 ZFAND3Q9H8U3 227 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 IGHV3OR16-13A0A075B7E8 117 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 IGHV3-74A0A0B4J1X5 117 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 LINC00614P0C842 121 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 ZNF80P51504 273 aaPredicted RBP11.38□□□□□ -0.59
CBWD3-205ENST00000469687 RELQ04864 619 aaPredicted RBP11.38□□□□□ -0.59
CBWD3-205ENST00000469687 BATFQ16520 125 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 TXN2Q99757 166 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 CRYBG3Q68DQ2 2970 aa11.38□□□□□ -0.59
CBWD3-205ENST00000469687 PRR25Q96S07 402 aa11.37□□□□□ -0.59
CBWD3-205ENST00000469687 SPG11Q96JI7 2443 aa11.37□□□□□ -0.59
CBWD3-205ENST00000469687 TMEM213A2RRL7 107 aa11.37□□□□□ -0.59
CBWD3-205ENST00000469687 RIGQ13278 110 aa11.37□□□□□ -0.59
CBWD3-205ENST00000469687 LYZL1Q6UWQ5 148 aa11.37□□□□□ -0.59
CBWD3-205ENST00000469687 CLEC19AQ6UXS0 136 aa11.37□□□□□ -0.59
CBWD3-205ENST00000469687 TMEM190Q8WZ59 177 aa11.37□□□□□ -0.59
CBWD3-205ENST00000469687 CHCHD1Q96BP2 118 aaKnown RBP11.37□□□□□ -0.59
CBWD3-205ENST00000469687 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
CBWD3-205ENST00000469687 PRAC2D3DTV9 90 aa11.36□□□□□ -0.59
CBWD3-205ENST00000469687 TCAPO15273 167 aa11.36□□□□□ -0.59
CBWD3-205ENST00000469687 SFTPCP11686 197 aa11.36□□□□□ -0.59
CBWD3-205ENST00000469687 RNF182Q8N6D2 247 aa11.36□□□□□ -0.59
CBWD3-205ENST00000469687 IGHV3-49A0A0A0MS15 119 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 CLPSL1A2RUU4 121 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 FAM162BQ5T6X4 162 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 BRD3OSQ6XYD6 125 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 C5orf56Q8N8D9 126 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 TMEM70Q9BUB7 260 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 ZNF207O43670 478 aaKnown RBP11.35□□□□□ -0.59
CBWD3-205ENST00000469687 BUB3O43684 328 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 SCGB2A1O75556 95 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 LEPROTL1O95214 131 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 ERCC8Q13216 396 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 GATD1Q8NB37 220 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 MCRIP2Q9BUT9 160 aaKnown RBP11.35□□□□□ -0.59
CBWD3-205ENST00000469687 UQCR10Q9UDW1 63 aa11.35□□□□□ -0.59
CBWD3-205ENST00000469687 TIMM8BQ9Y5J9 83 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-205ENST00000469687 SERTM2A0A1B0GWG4 89 aa11.34□□□□□ -0.59
CBWD3-205ENST00000469687 IGLL1P15814 213 aa11.34□□□□□ -0.59
CBWD3-205ENST00000469687 Q6ZN92 141 aa11.34□□□□□ -0.59
CBWD3-205ENST00000469687 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
CBWD3-205ENST00000469687 PIEZO1Q92508 2521 aa11.34□□□□□ -0.59
CBWD3-205ENST00000469687 FLNCQ14315 2725 aa11.34□□□□□ -0.59
CBWD3-205ENST00000469687 IGHV4-61A0A0C4DH41 118 aa11.34□□□□□ -0.59
CBWD3-205ENST00000469687 G0S2P27469 103 aa11.34□□□□□ -0.59
CBWD3-205ENST00000469687 TRAV9-2A0A087WT02 112 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 FAM106AQ4KMX7 169 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 Q6AWC8 147 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 KLK9Q9UKQ9 250 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 UTP20O75691 2785 aaKnown RBP11.33□□□□□ -0.6
CBWD3-205ENST00000469687 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 M0QZK8 103 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 CRXO43186 299 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-205ENST00000469687 SAPCD1Q5SSQ6 148 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 COX8CQ7Z4L0 72 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 MRPL52Q86TS9 123 aaKnown RBP11.33□□□□□ -0.6
CBWD3-205ENST00000469687 PIFOQ8TCI5 191 aa11.33□□□□□ -0.6
CBWD3-205ENST00000469687 OR4C46A6NHA9 309 aa11.32□□□□□ -0.6
CBWD3-205ENST00000469687 D6R8Y8 96 aa11.32□□□□□ -0.6
CBWD3-205ENST00000469687 H0Y8G0 127 aa11.32□□□□□ -0.6
CBWD3-205ENST00000469687 RPLP1P05386 114 aaKnown RBP11.32□□□□□ -0.6
CBWD3-205ENST00000469687 TFPI2P48307 235 aa11.32□□□□□ -0.6
CBWD3-205ENST00000469687 PAX8Q06710 450 aa11.32□□□□□ -0.6
CBWD3-205ENST00000469687 ZNF493Q6ZR52 646 aa11.32□□□□□ -0.6
CBWD3-205ENST00000469687 GOSR1O95249 250 aa11.31□□□□□ -0.6
CBWD3-205ENST00000469687 HNRNPA3P51991 378 aaKnown RBP11.31□□□□□ -0.6
CBWD3-205ENST00000469687 A0A1B0GW15 77 aa11.31□□□□□ -0.6
CBWD3-205ENST00000469687 LOXL1Q08397 574 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-205ENST00000469687 KLHDC1Q8N7A1 406 aa11.31□□□□□ -0.6
CBWD3-205ENST00000469687 EEF1AKMT3Q96AZ1 226 aa11.31□□□□□ -0.6
CBWD3-205ENST00000469687 PSMG3-AS1Q96PY0 264 aa11.31□□□□□ -0.6
CBWD3-205ENST00000469687 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 IFI27P40305 119 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-205ENST00000469687 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms