RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 UFC1Q9Y3C8 167 aa3.09□□□□□ -1.91
TMEM39A-204ENST00000468545 IGKV2D-30A0A075B6S6 120 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 IGHV7-4-1A0A0J9YVY3 117 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 A0A1W2PS18 150 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 hDV102S1A0JD36 115 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 H3BRN7 92 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 M0QZ24 198 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 OVOL1O14753 267 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 CXorf1O96002 111 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 HBE1P02100 147 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 NMBP08949 121 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 OR10J4P0C629 311 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 STAG3L2P0CL84 134 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 STAG3L3P0CL85 134 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 ARL14EPLP0DKL9 152 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 CBLN1P23435 193 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 GCHFRP30047 84 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 S100A7P31151 101 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 TAS2R45P59539 299 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 PLP1P60201 277 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 KLF5Q13887 457 aaPredicted RBP3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 HAGHQ16775 308 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 CLLU1Q5K131 121 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 CST9LP1Q5W188 147 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 DPPA3Q6W0C5 159 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 TCF24Q7RTU0 167 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 S100A7AQ86SG5 101 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 GBGT1Q8N5D6 347 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 OR9G4Q8NGQ1 327 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 DYNLRB2Q8TF09 96 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 MBD3L1Q8WWY6 194 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 TMEM190Q8WZ59 177 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 SAT2Q96F10 170 aaPredicted RBP3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 GRAMD2BQ96HH9 432 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF414Q96IQ9 312 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 C17orf77Q96MU5 243 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 ATP6V0BQ99437 205 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 RARRES2Q99969 163 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 SHANK2-AS3Q9BTD1 123 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 RHPN1-AS1Q9BWJ2 59 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 SLC25A2Q9BXI2 301 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 MRPL32Q9BYC8 188 aaKnown RBP3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 TMEM231Q9H6L2 316 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 GNG13Q9P2W3 67 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 SMPXQ9UHP9 88 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 RPH3ALQ9UNE2 315 aa3.08□□□□□ -1.92
TMEM39A-204ENST00000468545 TEP1Q99973 2627 aaKnown RBP3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 IGLV5-37A0A075B6J1 123 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 TMEM213A2RRL7 107 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 PGPA6NDG6 321 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 C2orf70A6NJV1 201 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 SEC14L6B5MCN3 397 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 H3BQ15 152 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 K7EMT4 169 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 DNASE2O00115 360 aaPredicted RBP3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 LGALS9O00182 355 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 VCYO14598 125 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 CHEK1O14757 476 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 BUB3O43684 328 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 SAP30O75446 220 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 IFNA1P01562 189 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 CSN3P07498 182 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 NBEAP1P0C6P0 100 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 FOLR2P14207 255 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 CRYBB3P26998 211 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 GALR1P47211 349 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 CEBPGP53567 150 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 SEC61BP60468 96 aaKnown RBP3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 RANP62826 216 aaKnown RBP3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 UBE2L3P68036 154 aaKnown RBP3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 KHDC3LQ587J8 217 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 C16orf54Q6UWD8 224 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 SIGLEC15Q6ZMC9 328 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 RBPMS2Q6ZRY4 209 aaKnown RBP3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 COMMD7Q86VX2 200 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 BPIFA4PQ86YQ2 179 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 SLC7A5P1Q8MH63 180 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 STXBP6Q8NFX7 210 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 OR4F17Q8NGA8 305 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 RXFP4Q8TDU9 374 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 MARC2Q969Z3 335 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 FAM167A-AS1Q96KT0 104 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 LINC00052Q96N35 136 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 OR4F4Q96R69 305 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 CITED1Q99966 193 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 EIF5A2Q9GZV4 153 aaKnown RBP3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 TREM1Q9NP99 234 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 DAZ1Q9NQZ3 744 aaKnown RBP3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF586Q9NXT0 402 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 SMAD5-AS1Q9Y6J3 95 aa3.07□□□□□ -1.92
TMEM39A-204ENST00000468545 HELTA6NFD8 242 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 RBFOX3A6NFN3 312 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 A8MZ25 164 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 SLC25A5P05141 298 aaKnown RBP3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 HIST1H1EP10412 219 aaKnown RBP3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 RPL7P18124 248 aaKnown RBP3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 HLA-DMBP28068 263 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 BMI1P35226 326 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 ATP5G3P48201 142 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 PSMB3P49720 205 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms